Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.72■■□□□ 1.23
PDS5AQ29RF7 AC024243.1-201ENST00000609234 778 ntBASIC22.72■■□□□ 1.23
PDS5AQ29RF7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDS5AQ29RF7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.72■■□□□ 1.23
PDS5AQ29RF7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDS5AQ29RF7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 MIR564-202ENST00000385049 94 ntBASIC22.71■■□□□ 1.23
PDS5AQ29RF7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AC068587.9-201ENST00000641814 219 ntBASIC22.71■■□□□ 1.23
PDS5AQ29RF7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDS5AQ29RF7 AC093484.2-201ENST00000580996 2166 ntBASIC22.7■■□□□ 1.23
PDS5AQ29RF7 AL032819.2-201ENST00000624543 2162 ntBASIC22.7■■□□□ 1.23
PDS5AQ29RF7 LINC01311-201ENST00000565162 1445 ntBASIC22.7■■□□□ 1.23
PDS5AQ29RF7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 PCDHAC2-203ENST00000615316 3011 ntBASIC22.7■■□□□ 1.22
PDS5AQ29RF7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 IER3-202ENST00000376377 1350 ntBASIC22.7■■□□□ 1.22
PDS5AQ29RF7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.7■■□□□ 1.22
PDS5AQ29RF7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 UPK3BP1-201ENST00000428678 509 ntBASIC22.69■■□□□ 1.22
PDS5AQ29RF7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.69■■□□□ 1.22
PDS5AQ29RF7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 VENTXP5-201ENST00000523979 775 ntBASIC22.68■■□□□ 1.22
PDS5AQ29RF7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 MIR3917-201ENST00000580971 93 ntBASIC22.68■■□□□ 1.22
PDS5AQ29RF7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDS5AQ29RF7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.67■■□□□ 1.22
PDS5AQ29RF7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms