Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1EQ15878 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1EQ15878 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.4■□□□□ 0.54
CACNA1EQ15878 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AC074051.2-201ENST00000565115 352 ntBASIC18.4■□□□□ 0.54
CACNA1EQ15878 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 HLA-A-201ENST00000376802 1334 ntBASIC18.4■□□□□ 0.54
CACNA1EQ15878 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AP000867.3-201ENST00000524675 377 ntBASIC18.4■□□□□ 0.54
CACNA1EQ15878 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1EQ15878 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1EQ15878 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CACNA1EQ15878 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.39■□□□□ 0.54
CACNA1EQ15878 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 AL662844.1-201ENST00000546340 181 ntBASIC18.39■□□□□ 0.53
CACNA1EQ15878 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1EQ15878 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1EQ15878 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 AC233702.3-201ENST00000578656 1387 ntBASIC18.38■□□□□ 0.53
CACNA1EQ15878 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 AC104819.1-201ENST00000504587 486 ntBASIC18.38■□□□□ 0.53
CACNA1EQ15878 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA1EQ15878 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.38■□□□□ 0.53
CACNA1EQ15878 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA1EQ15878 AL157384.1-201ENST00000445995 2473 ntBASIC18.38■□□□□ 0.53
CACNA1EQ15878 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms