Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.32■□□□□ 0.2
UBA52P62987 AL049637.2-201ENST00000641778 930 ntBASIC16.32■□□□□ 0.2
UBA52P62987 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBA52P62987 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 AL135905.2-201ENST00000584934 1404 ntBASIC16.31■□□□□ 0.2
UBA52P62987 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
UBA52P62987 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 PGM5P4-201ENST00000421970 445 ntBASIC16.31■□□□□ 0.2
UBA52P62987 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.31■□□□□ 0.2
UBA52P62987 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
UBA52P62987 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.31■□□□□ 0.2
UBA52P62987 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.31■□□□□ 0.2
UBA52P62987 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.31■□□□□ 0.2
UBA52P62987 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA52P62987 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBA52P62987 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 AC068880.1-201ENST00000507289 2297 ntBASIC16.3■□□□□ 0.2
UBA52P62987 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBA52P62987 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBA52P62987 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.3■□□□□ 0.2
UBA52P62987 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 AC005829.2-201ENST00000571422 1056 ntBASIC16.3■□□□□ 0.2
UBA52P62987 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
UBA52P62987 AC010331.1-201ENST00000611423 582 ntBASIC16.3■□□□□ 0.2
UBA52P62987 AC110285.5-201ENST00000611501 352 ntBASIC16.3■□□□□ 0.2
UBA52P62987 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
UBA52P62987 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBA52P62987 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA52P62987 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.29■□□□□ 0.2
UBA52P62987 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.29■□□□□ 0.2
UBA52P62987 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
UBA52P62987 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA52P62987 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA52P62987 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA52P62987 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA52P62987 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms