Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.58■□□□□ 0.89
SNRPFP62306 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.58■□□□□ 0.89
SNRPFP62306 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.58■□□□□ 0.89
SNRPFP62306 TSPY15P-201ENST00000457163 923 ntBASIC20.58■□□□□ 0.89
SNRPFP62306 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.58■□□□□ 0.89
SNRPFP62306 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 AC010653.2-201ENST00000623505 997 ntBASIC20.58■□□□□ 0.89
SNRPFP62306 AC116562.4-202ENST00000641738 218 ntBASIC20.58■□□□□ 0.89
SNRPFP62306 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNRPFP62306 AC092338.2-201ENST00000568827 1415 ntBASIC20.58■□□□□ 0.88
SNRPFP62306 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPFP62306 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPFP62306 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPFP62306 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRPFP62306 RCC2P3-201ENST00000418112 1537 ntBASIC20.58■□□□□ 0.88
SNRPFP62306 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.58■□□□□ 0.88
SNRPFP62306 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNRPFP62306 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRPFP62306 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRPFP62306 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
SNRPFP62306 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNRPFP62306 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRPFP62306 AL390955.1-201ENST00000428694 934 ntBASIC20.57■□□□□ 0.88
SNRPFP62306 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNRPFP62306 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRPFP62306 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.56■□□□□ 0.88
SNRPFP62306 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 AL023284.2-201ENST00000405850 579 ntBASIC20.56■□□□□ 0.88
SNRPFP62306 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SNRPFP62306 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.56■□□□□ 0.88
SNRPFP62306 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.56■□□□□ 0.88
SNRPFP62306 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.56■□□□□ 0.88
SNRPFP62306 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRPFP62306 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRPFP62306 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
SNRPFP62306 AL138781.2-201ENST00000617896 1843 ntBASIC20.55■□□□□ 0.88
SNRPFP62306 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.55■□□□□ 0.88
SNRPFP62306 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNRPFP62306 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
SNRPFP62306 MTMR9LP-203ENST00000426597 1545 ntBASIC20.55■□□□□ 0.88
SNRPFP62306 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.55■□□□□ 0.88
SNRPFP62306 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNRPFP62306 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
SNRPFP62306 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.55■□□□□ 0.88
SNRPFP62306 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.55■□□□□ 0.88
SNRPFP62306 AC128688.1-201ENST00000487626 519 ntBASIC20.55■□□□□ 0.88
SNRPFP62306 BX088651.1-201ENST00000540551 451 ntBASIC20.55■□□□□ 0.88
SNRPFP62306 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.55■□□□□ 0.88
SNRPFP62306 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.55■□□□□ 0.88
SNRPFP62306 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.55■□□□□ 0.88
SNRPFP62306 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRPFP62306 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
SNRPFP62306 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SNRPFP62306 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.54■□□□□ 0.88
SNRPFP62306 MCCD1P1-208ENST00000445732 328 ntBASIC20.54■□□□□ 0.88
SNRPFP62306 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 NAPSB-206ENST00000562112 1266 ntBASIC20.54■□□□□ 0.88
SNRPFP62306 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms