Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC005521.1-201ENST00000393351 872 ntBASIC18.11■□□□□ 0.49
VSX2P58304 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.11■□□□□ 0.49
VSX2P58304 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.11■□□□□ 0.49
VSX2P58304 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VSX2P58304 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.11■□□□□ 0.49
VSX2P58304 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.11■□□□□ 0.49
VSX2P58304 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VSX2P58304 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VSX2P58304 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VSX2P58304 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
VSX2P58304 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 IRX1P1-201ENST00000438849 1838 ntBASIC18.1■□□□□ 0.49
VSX2P58304 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
VSX2P58304 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 AC113347.1-201ENST00000413321 391 ntBASIC18.1■□□□□ 0.49
VSX2P58304 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.1■□□□□ 0.49
VSX2P58304 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.1■□□□□ 0.49
VSX2P58304 AP003041.3-201ENST00000527151 707 ntBASIC18.1■□□□□ 0.49
VSX2P58304 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
VSX2P58304 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
VSX2P58304 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
VSX2P58304 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VSX2P58304 AC005332.7-201ENST00000614046 2005 ntBASIC18.1■□□□□ 0.49
VSX2P58304 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VSX2P58304 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.09■□□□□ 0.49
VSX2P58304 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
VSX2P58304 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.09■□□□□ 0.49
VSX2P58304 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VSX2P58304 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VSX2P58304 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VSX2P58304 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.09■□□□□ 0.49
VSX2P58304 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 RCN1P1-201ENST00000400413 996 ntBASIC18.09■□□□□ 0.49
VSX2P58304 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.09■□□□□ 0.49
VSX2P58304 LIN28AP1-201ENST00000429574 405 ntBASIC18.09■□□□□ 0.49
VSX2P58304 AL137013.1-201ENST00000432946 1228 ntBASIC18.09■□□□□ 0.49
VSX2P58304 KRT18P57-201ENST00000443599 1254 ntBASIC18.09■□□□□ 0.49
VSX2P58304 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VSX2P58304 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VSX2P58304 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.09■□□□□ 0.49
VSX2P58304 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 AC010653.2-201ENST00000623505 997 ntBASIC18.09■□□□□ 0.49
VSX2P58304 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.09■□□□□ 0.49
VSX2P58304 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VSX2P58304 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VSX2P58304 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
VSX2P58304 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VSX2P58304 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
VSX2P58304 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.08■□□□□ 0.49
VSX2P58304 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
VSX2P58304 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
VSX2P58304 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VSX2P58304 AC120498.9-201ENST00000339021 3867 ntBASIC18.08■□□□□ 0.49
VSX2P58304 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VSX2P58304 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.49
VSX2P58304 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.08■□□□□ 0.49
VSX2P58304 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
VSX2P58304 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.08■□□□□ 0.49
VSX2P58304 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
VSX2P58304 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VSX2P58304 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.08■□□□□ 0.49
VSX2P58304 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
VSX2P58304 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.08■□□□□ 0.49
VSX2P58304 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.08■□□□□ 0.48
VSX2P58304 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.08■□□□□ 0.48
VSX2P58304 TERF1P1-201ENST00000311003 1181 ntBASIC18.08■□□□□ 0.48
VSX2P58304 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.08■□□□□ 0.48
VSX2P58304 HMGA1P5-201ENST00000412453 271 ntBASIC18.08■□□□□ 0.48
VSX2P58304 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.08■□□□□ 0.48
VSX2P58304 FAM210CP-201ENST00000445714 574 ntBASIC18.08■□□□□ 0.48
VSX2P58304 ATP5G1P1-201ENST00000448724 379 ntBASIC18.08■□□□□ 0.48
VSX2P58304 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.08■□□□□ 0.48
VSX2P58304 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VSX2P58304 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.08■□□□□ 0.48
VSX2P58304 FEM1AP3-201ENST00000403722 1741 ntBASIC18.08■□□□□ 0.48
VSX2P58304 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms