Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3AP56704 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.14■□□□□ 0.65
WNT3AP56704 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3AP56704 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3AP56704 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
WNT3AP56704 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.14■□□□□ 0.65
WNT3AP56704 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 MFAP1P1-201ENST00000442257 1255 ntBASIC19.13■□□□□ 0.65
WNT3AP56704 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.13■□□□□ 0.65
WNT3AP56704 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.13■□□□□ 0.65
WNT3AP56704 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.13■□□□□ 0.65
WNT3AP56704 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.13■□□□□ 0.65
WNT3AP56704 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.13■□□□□ 0.65
WNT3AP56704 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 KRT8P3-201ENST00000519669 1449 ntBASIC19.13■□□□□ 0.65
WNT3AP56704 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
WNT3AP56704 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.13■□□□□ 0.65
WNT3AP56704 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.13■□□□□ 0.65
WNT3AP56704 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.13■□□□□ 0.65
WNT3AP56704 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
WNT3AP56704 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
WNT3AP56704 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
WNT3AP56704 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
WNT3AP56704 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
WNT3AP56704 AL020996.1-203ENST00000536896 2307 ntBASIC19.12■□□□□ 0.65
WNT3AP56704 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
WNT3AP56704 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
WNT3AP56704 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
WNT3AP56704 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
WNT3AP56704 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.12■□□□□ 0.65
WNT3AP56704 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
WNT3AP56704 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.12■□□□□ 0.65
WNT3AP56704 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
WNT3AP56704 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
WNT3AP56704 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.12■□□□□ 0.65
WNT3AP56704 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
WNT3AP56704 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
WNT3AP56704 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
WNT3AP56704 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
WNT3AP56704 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.11■□□□□ 0.65
WNT3AP56704 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.11■□□□□ 0.65
WNT3AP56704 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
WNT3AP56704 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
WNT3AP56704 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
WNT3AP56704 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.11■□□□□ 0.65
WNT3AP56704 AC093525.10-201ENST00000625130 1569 ntBASIC19.1■□□□□ 0.65
WNT3AP56704 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.1■□□□□ 0.65
WNT3AP56704 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
WNT3AP56704 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.1■□□□□ 0.65
WNT3AP56704 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
WNT3AP56704 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
WNT3AP56704 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms