Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF144AP50876 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF144AP50876 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF144AP50876 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF144AP50876 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF144AP50876 AC004980.1-204ENST00000429707 299 ntBASIC17.59■□□□□ 0.41
RNF144AP50876 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF144AP50876 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF144AP50876 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF144AP50876 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF144AP50876 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RNF144AP50876 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF144AP50876 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF144AP50876 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RNF144AP50876 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 TSPY23P-201ENST00000440136 739 ntBASIC17.58■□□□□ 0.4
RNF144AP50876 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF144AP50876 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF144AP50876 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF144AP50876 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF144AP50876 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF144AP50876 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF144AP50876 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF144AP50876 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF144AP50876 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF144AP50876 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.57■□□□□ 0.4
RNF144AP50876 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF144AP50876 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF144AP50876 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF144AP50876 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF144AP50876 AL445675.2-201ENST00000620291 557 ntBASIC17.57■□□□□ 0.4
RNF144AP50876 TMEM191A-211ENST00000637163 1067 ntBASIC17.57■□□□□ 0.4
RNF144AP50876 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF144AP50876 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF144AP50876 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF144AP50876 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.57■□□□□ 0.4
RNF144AP50876 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF144AP50876 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF144AP50876 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF144AP50876 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms