Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
FNTAP49354 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.67■□□□□ 0.74
FNTAP49354 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
FNTAP49354 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
FNTAP49354 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNTAP49354 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FNTAP49354 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FNTAP49354 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.66■□□□□ 0.74
FNTAP49354 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 TSPY6P-201ENST00000448518 926 ntBASIC19.66■□□□□ 0.74
FNTAP49354 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.66■□□□□ 0.74
FNTAP49354 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.66■□□□□ 0.74
FNTAP49354 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.66■□□□□ 0.74
FNTAP49354 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.66■□□□□ 0.74
FNTAP49354 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 AC012313.1-201ENST00000593393 3059 ntBASIC19.66■□□□□ 0.74
FNTAP49354 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FNTAP49354 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
FNTAP49354 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNTAP49354 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
FNTAP49354 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.65■□□□□ 0.74
FNTAP49354 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FNTAP49354 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
FNTAP49354 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 SOX15-203ENST00000570788 1093 ntBASIC19.65■□□□□ 0.74
FNTAP49354 AC008687.6-201ENST00000596318 630 ntBASIC19.65■□□□□ 0.74
FNTAP49354 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FNTAP49354 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 AC106820.2-201ENST00000563775 3264 ntBASIC19.65■□□□□ 0.74
FNTAP49354 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FNTAP49354 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
FNTAP49354 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
FNTAP49354 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNTAP49354 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNTAP49354 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FNTAP49354 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNTAP49354 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.64■□□□□ 0.74
FNTAP49354 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNTAP49354 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNTAP49354 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 TSPY23P-201ENST00000440136 739 ntBASIC19.64■□□□□ 0.73
FNTAP49354 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.64■□□□□ 0.73
FNTAP49354 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.64■□□□□ 0.73
FNTAP49354 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.64■□□□□ 0.73
FNTAP49354 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.64■□□□□ 0.73
FNTAP49354 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FNTAP49354 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FNTAP49354 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms