Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCL12P48061 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.85■□□□□ 0.61
CXCL12P48061 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CXCL12P48061 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
CXCL12P48061 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CXCL12P48061 AC117500.6-201ENST00000624871 588 ntBASIC18.85■□□□□ 0.61
CXCL12P48061 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CXCL12P48061 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL12P48061 LINC00565-201ENST00000562710 2331 ntBASIC18.85■□□□□ 0.61
CXCL12P48061 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL12P48061 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL12P48061 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 AC233702.3-201ENST00000578656 1387 ntBASIC18.84■□□□□ 0.61
CXCL12P48061 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL12P48061 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CXCL12P48061 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.84■□□□□ 0.61
CXCL12P48061 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CXCL12P48061 AC010240.3-201ENST00000607688 395 ntBASIC18.84■□□□□ 0.61
CXCL12P48061 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL12P48061 AL391422.3-201ENST00000603791 2761 ntBASIC18.84■□□□□ 0.61
CXCL12P48061 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL12P48061 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CXCL12P48061 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL12P48061 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL12P48061 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL12P48061 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL12P48061 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.83■□□□□ 0.6
CXCL12P48061 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL12P48061 AL590627.1-203ENST00000421194 1026 ntBASIC18.83■□□□□ 0.6
CXCL12P48061 AC104390.1-201ENST00000555663 520 ntBASIC18.83■□□□□ 0.6
CXCL12P48061 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL12P48061 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL12P48061 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.83■□□□□ 0.6
CXCL12P48061 AL390719.2-201ENST00000606993 987 ntBASIC18.83■□□□□ 0.6
CXCL12P48061 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.83■□□□□ 0.6
CXCL12P48061 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL12P48061 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CXCL12P48061 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL12P48061 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CXCL12P48061 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.82■□□□□ 0.6
CXCL12P48061 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.82■□□□□ 0.6
CXCL12P48061 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL12P48061 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL12P48061 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.82■□□□□ 0.6
CXCL12P48061 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CXCL12P48061 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.82■□□□□ 0.6
CXCL12P48061 AC064862.7-201ENST00000604520 867 ntBASIC18.82■□□□□ 0.6
CXCL12P48061 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL12P48061 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL12P48061 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CXCL12P48061 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CXCL12P48061 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL12P48061 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 AL162377.1-201ENST00000618844 1793 ntBASIC18.81■□□□□ 0.6
CXCL12P48061 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL12P48061 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCL12P48061 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.81■□□□□ 0.6
CXCL12P48061 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL12P48061 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXCL12P48061 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL12P48061 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL12P48061 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CXCL12P48061 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms