Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AC131212.4-201ENST00000623606 975 ntBASIC19.2■□□□□ 0.66
GRIA1P42261 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.2■□□□□ 0.66
GRIA1P42261 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GRIA1P42261 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GRIA1P42261 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.2■□□□□ 0.66
GRIA1P42261 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GRIA1P42261 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GRIA1P42261 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.19■□□□□ 0.66
GRIA1P42261 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
GRIA1P42261 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.19■□□□□ 0.66
GRIA1P42261 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 RCC2P6-201ENST00000526625 1557 ntBASIC19.19■□□□□ 0.66
GRIA1P42261 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GRIA1P42261 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GRIA1P42261 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.18■□□□□ 0.66
GRIA1P42261 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.18■□□□□ 0.66
GRIA1P42261 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GRIA1P42261 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.18■□□□□ 0.66
GRIA1P42261 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.18■□□□□ 0.66
GRIA1P42261 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.18■□□□□ 0.66
GRIA1P42261 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
GRIA1P42261 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GRIA1P42261 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.18■□□□□ 0.66
GRIA1P42261 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.18■□□□□ 0.66
GRIA1P42261 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.18■□□□□ 0.66
GRIA1P42261 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
GRIA1P42261 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 AC090164.3-201ENST00000610780 2143 ntBASIC19.18■□□□□ 0.66
GRIA1P42261 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GRIA1P42261 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GRIA1P42261 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GRIA1P42261 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA1P42261 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GRIA1P42261 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 KSR1P1-201ENST00000446298 240 ntBASIC19.17■□□□□ 0.66
GRIA1P42261 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 AF186192.3-201ENST00000583427 947 ntBASIC19.17■□□□□ 0.66
GRIA1P42261 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.17■□□□□ 0.66
GRIA1P42261 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.17■□□□□ 0.66
GRIA1P42261 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GRIA1P42261 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
GRIA1P42261 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GRIA1P42261 PRORSD1P-201ENST00000295112 541 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms