Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VARSP26640 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VARSP26640 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.59■□□□□ 0.57
VARSP26640 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 RARRES2P10-201ENST00000564312 460 ntBASIC18.59■□□□□ 0.57
VARSP26640 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.59■□□□□ 0.57
VARSP26640 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VARSP26640 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.59■□□□□ 0.57
VARSP26640 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.59■□□□□ 0.57
VARSP26640 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.59■□□□□ 0.57
VARSP26640 AL161938.1-201ENST00000569833 2180 ntBASIC18.59■□□□□ 0.57
VARSP26640 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VARSP26640 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VARSP26640 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.59■□□□□ 0.57
VARSP26640 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VARSP26640 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VARSP26640 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VARSP26640 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VARSP26640 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.58■□□□□ 0.57
VARSP26640 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
VARSP26640 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
VARSP26640 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VARSP26640 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.57
VARSP26640 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.58■□□□□ 0.57
VARSP26640 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
VARSP26640 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VARSP26640 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 KRT18P21-201ENST00000515767 1272 ntBASIC18.58■□□□□ 0.56
VARSP26640 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.58■□□□□ 0.56
VARSP26640 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.58■□□□□ 0.56
VARSP26640 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VARSP26640 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
VARSP26640 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
VARSP26640 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
VARSP26640 AC141586.3-201ENST00000562166 1838 ntBASIC18.58■□□□□ 0.56
VARSP26640 AL138781.2-201ENST00000617896 1843 ntBASIC18.58■□□□□ 0.56
VARSP26640 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
VARSP26640 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
VARSP26640 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.57■□□□□ 0.56
VARSP26640 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.57■□□□□ 0.56
VARSP26640 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 HTR7P1-201ENST00000538670 1336 ntBASIC18.57■□□□□ 0.56
VARSP26640 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.57■□□□□ 0.56
VARSP26640 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VARSP26640 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.57■□□□□ 0.56
VARSP26640 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.57■□□□□ 0.56
VARSP26640 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.57■□□□□ 0.56
VARSP26640 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.57■□□□□ 0.56
VARSP26640 AC133561.5-201ENST00000635547 218 ntBASIC18.57■□□□□ 0.56
VARSP26640 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VARSP26640 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VARSP26640 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.57■□□□□ 0.56
VARSP26640 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.56■□□□□ 0.56
VARSP26640 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.56■□□□□ 0.56
VARSP26640 TSPY7P-201ENST00000431358 1114 ntBASIC18.56■□□□□ 0.56
VARSP26640 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.56■□□□□ 0.56
VARSP26640 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.56■□□□□ 0.56
VARSP26640 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VARSP26640 CROCCP3-202ENST00000420820 1947 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms