Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.91■□□□□ 0.14
LMO1P25800 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LMO1P25800 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LMO1P25800 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LMO1P25800 PRSS44-201ENST00000515154 1146 ntBASIC15.91■□□□□ 0.14
LMO1P25800 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.91■□□□□ 0.14
LMO1P25800 AF186192.3-201ENST00000583427 947 ntBASIC15.91■□□□□ 0.14
LMO1P25800 AC073195.1-201ENST00000607241 877 ntBASIC15.91■□□□□ 0.14
LMO1P25800 AC083906.6-201ENST00000641366 219 ntBASIC15.91■□□□□ 0.14
LMO1P25800 AL031985.4-201ENST00000642138 673 ntBASIC15.91■□□□□ 0.14
LMO1P25800 KRT16P1-201ENST00000399124 1418 ntBASIC15.91■□□□□ 0.14
LMO1P25800 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LMO1P25800 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.91■□□□□ 0.14
LMO1P25800 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LMO1P25800 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.91■□□□□ 0.14
LMO1P25800 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.9■□□□□ 0.14
LMO1P25800 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.9■□□□□ 0.14
LMO1P25800 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.9■□□□□ 0.14
LMO1P25800 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.9■□□□□ 0.14
LMO1P25800 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 KRT18P29-201ENST00000397031 1267 ntBASIC15.9■□□□□ 0.14
LMO1P25800 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.9■□□□□ 0.14
LMO1P25800 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.9■□□□□ 0.14
LMO1P25800 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.9■□□□□ 0.14
LMO1P25800 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.9■□□□□ 0.14
LMO1P25800 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.9■□□□□ 0.14
LMO1P25800 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 KRT8P11-201ENST00000409686 1436 ntBASIC15.9■□□□□ 0.14
LMO1P25800 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LMO1P25800 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LMO1P25800 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LMO1P25800 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 AL135905.2-201ENST00000584934 1404 ntBASIC15.89■□□□□ 0.13
LMO1P25800 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 AC004951.3-201ENST00000418645 1148 ntBASIC15.89■□□□□ 0.13
LMO1P25800 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LMO1P25800 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.89■□□□□ 0.13
LMO1P25800 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LMO1P25800 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LMO1P25800 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LMO1P25800 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LMO1P25800 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.88■□□□□ 0.13
LMO1P25800 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LMO1P25800 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms