Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
PDE6GP18545 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6GP18545 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
PDE6GP18545 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
PDE6GP18545 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6GP18545 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC11.72□□□□□ -0.53
PDE6GP18545 AC097381.1-201ENST00000429019 1296 ntBASIC11.72□□□□□ -0.53
PDE6GP18545 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 AC083906.6-201ENST00000641366 219 ntBASIC11.72□□□□□ -0.53
PDE6GP18545 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC11.72□□□□□ -0.53
PDE6GP18545 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PDE6GP18545 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PDE6GP18545 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC11.71□□□□□ -0.53
PDE6GP18545 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.71□□□□□ -0.53
PDE6GP18545 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PDE6GP18545 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PDE6GP18545 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PDE6GP18545 TSPY13P-201ENST00000338964 914 ntBASIC11.71□□□□□ -0.53
PDE6GP18545 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 SAPCD2P1-201ENST00000395413 1184 ntBASIC11.71□□□□□ -0.53
PDE6GP18545 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 AC004987.1-201ENST00000428627 508 ntBASIC11.71□□□□□ -0.53
PDE6GP18545 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 AK3-203ENST00000447596 705 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC11.71□□□□□ -0.53
PDE6GP18545 AC011298.3-201ENST00000615796 283 ntBASIC11.71□□□□□ -0.53
PDE6GP18545 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PDE6GP18545 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
PDE6GP18545 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
PDE6GP18545 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
PDE6GP18545 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PDE6GP18545 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
PDE6GP18545 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC11.7□□□□□ -0.54
PDE6GP18545 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC11.7□□□□□ -0.54
PDE6GP18545 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.7□□□□□ -0.54
PDE6GP18545 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.7□□□□□ -0.54
PDE6GP18545 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PDE6GP18545 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms