Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 TEX21P-204ENST00000641479 1693 ntBASIC23.17■■□□□ 1.3
COL11A2P13942 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
COL11A2P13942 AP001005.1-201ENST00000571755 1248 ntBASIC23.17■■□□□ 1.3
COL11A2P13942 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
COL11A2P13942 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.17■■□□□ 1.3
COL11A2P13942 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.17■■□□□ 1.3
COL11A2P13942 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COL11A2P13942 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.17■■□□□ 1.3
COL11A2P13942 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.17■■□□□ 1.3
COL11A2P13942 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A2P13942 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 AP003733.1-201ENST00000491725 852 ntBASIC23.16■■□□□ 1.3
COL11A2P13942 AC090616.6-201ENST00000582640 721 ntBASIC23.16■■□□□ 1.3
COL11A2P13942 AL773604.1-201ENST00000617417 272 ntBASIC23.16■■□□□ 1.3
COL11A2P13942 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
COL11A2P13942 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 AC008556.1-201ENST00000610908 2040 ntBASIC23.16■■□□□ 1.3
COL11A2P13942 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
COL11A2P13942 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A2P13942 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COL11A2P13942 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.16■■□□□ 1.3
COL11A2P13942 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.16■■□□□ 1.3
COL11A2P13942 AC139530.3-201ENST00000620344 690 ntBASIC23.16■■□□□ 1.3
COL11A2P13942 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL11A2P13942 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A2P13942 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.15■■□□□ 1.3
COL11A2P13942 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.15■■□□□ 1.3
COL11A2P13942 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.15■■□□□ 1.3
COL11A2P13942 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
COL11A2P13942 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
COL11A2P13942 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.15■■□□□ 1.3
COL11A2P13942 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.15■■□□□ 1.3
COL11A2P13942 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.15■■□□□ 1.3
COL11A2P13942 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.15■■□□□ 1.3
COL11A2P13942 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.15■■□□□ 1.3
COL11A2P13942 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.15■■□□□ 1.3
COL11A2P13942 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL11A2P13942 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.15■■□□□ 1.3
COL11A2P13942 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 AL109659.2-201ENST00000606809 1674 ntBASIC23.15■■□□□ 1.3
COL11A2P13942 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A2P13942 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL11A2P13942 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A2P13942 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.14■■□□□ 1.3
COL11A2P13942 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A2P13942 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
COL11A2P13942 MIR574-201ENST00000385209 96 ntBASIC23.14■■□□□ 1.3
COL11A2P13942 IGHGP-201ENST00000390555 1178 ntBASIC23.14■■□□□ 1.3
COL11A2P13942 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A2P13942 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
COL11A2P13942 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.14■■□□□ 1.3
COL11A2P13942 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A2P13942 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.14■■□□□ 1.3
COL11A2P13942 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
COL11A2P13942 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A2P13942 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.14■■□□□ 1.3
COL11A2P13942 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.14■■□□□ 1.3
COL11A2P13942 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A2P13942 AC243591.1-201ENST00000452967 1364 ntBASIC23.14■■□□□ 1.29
COL11A2P13942 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A2P13942 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A2P13942 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL11A2P13942 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
COL11A2P13942 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A2P13942 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A2P13942 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.13■■□□□ 1.29
COL11A2P13942 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A2P13942 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
COL11A2P13942 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms