Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.25■□□□□ 0.51
CCNYL3P0C7X3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNYL3P0C7X3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 AC007663.1-201ENST00000438948 1240 ntBASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 AC006011.2-201ENST00000621313 1158 ntBASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.23■□□□□ 0.51
CCNYL3P0C7X3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 WWOX-216ENST00000569818 525 ntBASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNYL3P0C7X3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNYL3P0C7X3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNYL3P0C7X3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNYL3P0C7X3 AC018445.3-201ENST00000624177 1945 ntBASIC18.21■□□□□ 0.51
CCNYL3P0C7X3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCNYL3P0C7X3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms