Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.7■□□□□ 0.9
CLTAP09496 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.7■□□□□ 0.9
CLTAP09496 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLTAP09496 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLTAP09496 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.69■□□□□ 0.9
CLTAP09496 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CLTAP09496 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLTAP09496 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 INGX-201ENST00000359239 846 ntBASIC20.69■□□□□ 0.9
CLTAP09496 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CLTAP09496 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.69■□□□□ 0.9
CLTAP09496 AC005363.2-201ENST00000618631 242 ntBASIC20.69■□□□□ 0.9
CLTAP09496 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.69■□□□□ 0.9
CLTAP09496 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLTAP09496 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 AC092338.2-201ENST00000568827 1415 ntBASIC20.69■□□□□ 0.9
CLTAP09496 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLTAP09496 AC018445.3-201ENST00000624177 1945 ntBASIC20.68■□□□□ 0.9
CLTAP09496 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.68■□□□□ 0.9
CLTAP09496 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.68■□□□□ 0.9
CLTAP09496 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 ECEL1P2-202ENST00000465689 757 ntBASIC20.68■□□□□ 0.9
CLTAP09496 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.68■□□□□ 0.9
CLTAP09496 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.68■□□□□ 0.9
CLTAP09496 AL353719.1-201ENST00000566847 864 ntBASIC20.68■□□□□ 0.9
CLTAP09496 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.68■□□□□ 0.9
CLTAP09496 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLTAP09496 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.68■□□□□ 0.9
CLTAP09496 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.67■□□□□ 0.9
CLTAP09496 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CLTAP09496 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.67■□□□□ 0.9
CLTAP09496 AC007663.1-201ENST00000438948 1240 ntBASIC20.67■□□□□ 0.9
CLTAP09496 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.67■□□□□ 0.9
CLTAP09496 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.67■□□□□ 0.9
CLTAP09496 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 FAM87A-204ENST00000613235 858 ntBASIC20.67■□□□□ 0.9
CLTAP09496 AC010653.2-201ENST00000623505 997 ntBASIC20.67■□□□□ 0.9
CLTAP09496 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLTAP09496 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.67■□□□□ 0.9
CLTAP09496 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLTAP09496 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLTAP09496 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.66■□□□□ 0.9
CLTAP09496 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 SLC25A3P1-201ENST00000443844 931 ntBASIC20.66■□□□□ 0.9
CLTAP09496 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.66■□□□□ 0.9
CLTAP09496 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CLTAP09496 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.66■□□□□ 0.9
CLTAP09496 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLTAP09496 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLTAP09496 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.66■□□□□ 0.9
CLTAP09496 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLTAP09496 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLTAP09496 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLTAP09496 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.66■□□□□ 0.9
CLTAP09496 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.65■□□□□ 0.9
CLTAP09496 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 AC098818.2-201ENST00000564925 2320 ntBASIC20.65■□□□□ 0.9
CLTAP09496 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 AC141586.3-201ENST00000562166 1838 ntBASIC20.65■□□□□ 0.9
CLTAP09496 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLTAP09496 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms