Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL1A1P02452 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL1A1P02452 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.82■■□□□ 1.24
COL1A1P02452 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
COL1A1P02452 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.82■■□□□ 1.24
COL1A1P02452 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 HBZP1-201ENST00000354915 429 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 RASA4DP-201ENST00000460726 1199 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 AC092597.1-201ENST00000487352 616 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 AC024243.1-201ENST00000609234 778 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 NPAP1P7-201ENST00000613027 823 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.82■■□□□ 1.24
COL1A1P02452 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.82■■□□□ 1.24
COL1A1P02452 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.82■■□□□ 1.24
COL1A1P02452 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL1A1P02452 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL1A1P02452 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.82■■□□□ 1.24
COL1A1P02452 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A1P02452 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.81■■□□□ 1.24
COL1A1P02452 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
COL1A1P02452 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A1P02452 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A1P02452 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 AC008556.1-201ENST00000610908 2040 ntBASIC22.81■■□□□ 1.24
COL1A1P02452 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A1P02452 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.81■■□□□ 1.24
COL1A1P02452 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL1A1P02452 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.81■■□□□ 1.24
COL1A1P02452 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A1P02452 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A1P02452 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.8■■□□□ 1.24
COL1A1P02452 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.8■■□□□ 1.24
COL1A1P02452 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A1P02452 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.8■■□□□ 1.24
COL1A1P02452 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.8■■□□□ 1.24
COL1A1P02452 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.8■■□□□ 1.24
COL1A1P02452 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL1A1P02452 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.8■■□□□ 1.24
COL1A1P02452 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL1A1P02452 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.79■■□□□ 1.24
COL1A1P02452 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.79■■□□□ 1.24
COL1A1P02452 AC012313.10-201ENST00000623509 926 ntBASIC22.79■■□□□ 1.24
COL1A1P02452 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL1A1P02452 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 AC093484.2-201ENST00000580996 2166 ntBASIC22.79■■□□□ 1.24
COL1A1P02452 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL1A1P02452 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.79■■□□□ 1.24
COL1A1P02452 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL1A1P02452 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL1A1P02452 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.78■■□□□ 1.24
COL1A1P02452 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A1P02452 AL109659.2-201ENST00000606809 1674 ntBASIC22.78■■□□□ 1.24
COL1A1P02452 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
COL1A1P02452 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A1P02452 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
COL1A1P02452 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
COL1A1P02452 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A1P02452 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.78■■□□□ 1.24
COL1A1P02452 FEM1AP3-201ENST00000403722 1741 ntBASIC22.78■■□□□ 1.24
COL1A1P02452 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
COL1A1P02452 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.78■■□□□ 1.24
COL1A1P02452 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.78■■□□□ 1.24
COL1A1P02452 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.78■■□□□ 1.24
COL1A1P02452 AC079602.3-201ENST00000623931 403 ntBASIC22.78■■□□□ 1.24
COL1A1P02452 AC007952.6-201ENST00000573168 2673 ntBASIC22.78■■□□□ 1.24
COL1A1P02452 AC003957.1-201ENST00000625108 2673 ntBASIC22.78■■□□□ 1.24
COL1A1P02452 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL1A1P02452 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A1P02452 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms