Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT4O95628 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT4O95628 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT4O95628 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT4O95628 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT4O95628 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT4O95628 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT4O95628 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 AC120498.9-201ENST00000339021 3867 ntBASIC16.82■□□□□ 0.28
CNOT4O95628 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT4O95628 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNOT4O95628 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT4O95628 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNOT4O95628 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.81■□□□□ 0.28
CNOT4O95628 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT4O95628 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNOT4O95628 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT4O95628 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 TSPY23P-201ENST00000440136 739 ntBASIC16.81■□□□□ 0.28
CNOT4O95628 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT4O95628 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNOT4O95628 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT4O95628 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT4O95628 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT4O95628 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.8■□□□□ 0.28
CNOT4O95628 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CNOT4O95628 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CNOT4O95628 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.8■□□□□ 0.28
CNOT4O95628 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT4O95628 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CNOT4O95628 AL137013.1-201ENST00000432946 1228 ntBASIC16.8■□□□□ 0.28
CNOT4O95628 KRT18P57-201ENST00000443599 1254 ntBASIC16.8■□□□□ 0.28
CNOT4O95628 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.8■□□□□ 0.28
CNOT4O95628 AL512604.3-201ENST00000569583 964 ntBASIC16.8■□□□□ 0.28
CNOT4O95628 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 AL023803.3-201ENST00000615559 522 ntBASIC16.8■□□□□ 0.28
CNOT4O95628 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT4O95628 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNOT4O95628 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.8■□□□□ 0.28
CNOT4O95628 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CNOT4O95628 Z82202.1-201ENST00000623446 1880 ntBASIC16.8■□□□□ 0.28
CNOT4O95628 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNOT4O95628 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CNOT4O95628 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CNOT4O95628 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.79■□□□□ 0.28
CNOT4O95628 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.79■□□□□ 0.28
CNOT4O95628 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.79■□□□□ 0.28
CNOT4O95628 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CNOT4O95628 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CNOT4O95628 AL353719.1-201ENST00000566847 864 ntBASIC16.79■□□□□ 0.28
CNOT4O95628 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CNOT4O95628 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.79■□□□□ 0.28
CNOT4O95628 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.79■□□□□ 0.28
CNOT4O95628 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNOT4O95628 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms