Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 PBK-203ENST00000522944 1499 ntTSL 2 BASIC26.67■■□□□ 1.86
NPHP4O75161 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
NPHP4O75161 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NPHP4O75161 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
NPHP4O75161 ZNF815P-204ENST00000434898 1737 ntBASIC26.66■■□□□ 1.86
NPHP4O75161 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
NPHP4O75161 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPHP4O75161 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPHP4O75161 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
NPHP4O75161 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC26.66■■□□□ 1.86
NPHP4O75161 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC26.66■■□□□ 1.86
NPHP4O75161 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NPHP4O75161 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.66■■□□□ 1.86
NPHP4O75161 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.66■■□□□ 1.86
NPHP4O75161 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
NPHP4O75161 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.66■■□□□ 1.86
NPHP4O75161 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
NPHP4O75161 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
NPHP4O75161 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
NPHP4O75161 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.65■■□□□ 1.86
NPHP4O75161 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC26.65■■□□□ 1.86
NPHP4O75161 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.65■■□□□ 1.86
NPHP4O75161 AL591684.3-201ENST00000605187 298 ntBASIC26.65■■□□□ 1.86
NPHP4O75161 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.65■■□□□ 1.86
NPHP4O75161 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.65■■□□□ 1.86
NPHP4O75161 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC26.65■■□□□ 1.86
NPHP4O75161 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NPHP4O75161 RPSAP43-201ENST00000402237 625 ntBASIC26.65■■□□□ 1.86
NPHP4O75161 GPX1P2-201ENST00000429271 606 ntBASIC26.65■■□□□ 1.86
NPHP4O75161 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC26.65■■□□□ 1.86
NPHP4O75161 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.65■■□□□ 1.86
NPHP4O75161 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.65■■□□□ 1.86
NPHP4O75161 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
NPHP4O75161 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NPHP4O75161 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
NPHP4O75161 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
NPHP4O75161 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.64■■□□□ 1.86
NPHP4O75161 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC26.64■■□□□ 1.86
NPHP4O75161 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.64■■□□□ 1.86
NPHP4O75161 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.64■■□□□ 1.85
NPHP4O75161 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.64■■□□□ 1.85
NPHP4O75161 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
NPHP4O75161 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC26.64■■□□□ 1.85
NPHP4O75161 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.64■■□□□ 1.85
NPHP4O75161 AC114341.1-201ENST00000618070 349 ntBASIC26.64■■□□□ 1.85
NPHP4O75161 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NPHP4O75161 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.63■■□□□ 1.85
NPHP4O75161 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPHP4O75161 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPHP4O75161 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
NPHP4O75161 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
NPHP4O75161 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.63■■□□□ 1.85
NPHP4O75161 HNRNPA1P28-201ENST00000424481 961 ntBASIC26.63■■□□□ 1.85
NPHP4O75161 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC26.63■■□□□ 1.85
NPHP4O75161 HNRNPDP1-201ENST00000439535 754 ntBASIC26.63■■□□□ 1.85
NPHP4O75161 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NPHP4O75161 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC26.63■■□□□ 1.85
NPHP4O75161 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.63■■□□□ 1.85
NPHP4O75161 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NPHP4O75161 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPHP4O75161 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.62■■□□□ 1.85
NPHP4O75161 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
NPHP4O75161 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NPHP4O75161 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NPHP4O75161 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
NPHP4O75161 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
NPHP4O75161 AC116407.3-201ENST00000623905 1129 ntBASIC26.62■■□□□ 1.85
NPHP4O75161 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 FGFR3P6-201ENST00000457012 610 ntBASIC26.61■■□□□ 1.85
NPHP4O75161 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.61■■□□□ 1.85
NPHP4O75161 MIR5100-201ENST00000579544 119 ntBASIC26.61■■□□□ 1.85
NPHP4O75161 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.61■■□□□ 1.85
NPHP4O75161 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.61■■□□□ 1.85
NPHP4O75161 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC26.61■■□□□ 1.85
NPHP4O75161 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.61■■□□□ 1.85
NPHP4O75161 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.61■■□□□ 1.85
NPHP4O75161 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC26.61■■□□□ 1.85
NPHP4O75161 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NPHP4O75161 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NPHP4O75161 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NPHP4O75161 SDHAP1-207ENST00000440850 2000 ntBASIC26.6■■□□□ 1.85
NPHP4O75161 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NPHP4O75161 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.6■■□□□ 1.85
NPHP4O75161 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC26.6■■□□□ 1.85
NPHP4O75161 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms