Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMAD6O43541 AL512353.2-201ENST00000448759 1962 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 AK4P3-201ENST00000418260 669 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 AC009947.2-201ENST00000444014 672 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 YBX1P2-201ENST00000489612 999 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.13■□□□□ 0.65
SMAD6O43541 AL512604.3-201ENST00000569583 964 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.13■□□□□ 0.65
SMAD6O43541 AC011558.1-201ENST00000623459 338 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.13■□□□□ 0.65
SMAD6O43541 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
SMAD6O43541 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD6O43541 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.13■□□□□ 0.65
SMAD6O43541 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.13■□□□□ 0.65
SMAD6O43541 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.12■□□□□ 0.65
SMAD6O43541 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMAD6O43541 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMAD6O43541 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.12■□□□□ 0.65
SMAD6O43541 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.12■□□□□ 0.65
SMAD6O43541 COX11P1-201ENST00000489116 835 ntBASIC19.12■□□□□ 0.65
SMAD6O43541 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.12■□□□□ 0.65
SMAD6O43541 WWOX-216ENST00000569818 525 ntBASIC19.12■□□□□ 0.65
SMAD6O43541 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 AL023973.1-201ENST00000624619 620 ntBASIC19.12■□□□□ 0.65
SMAD6O43541 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMAD6O43541 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.12■□□□□ 0.65
SMAD6O43541 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMAD6O43541 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.11■□□□□ 0.65
SMAD6O43541 AC036111.1-201ENST00000533973 1582 ntBASIC19.11■□□□□ 0.65
SMAD6O43541 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 RCC2P3-201ENST00000418112 1537 ntBASIC19.11■□□□□ 0.65
SMAD6O43541 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.11■□□□□ 0.65
SMAD6O43541 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.11■□□□□ 0.65
SMAD6O43541 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMAD6O43541 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.11■□□□□ 0.65
SMAD6O43541 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.11■□□□□ 0.65
SMAD6O43541 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SMAD6O43541 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
SMAD6O43541 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.11■□□□□ 0.65
SMAD6O43541 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.11■□□□□ 0.65
SMAD6O43541 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.11■□□□□ 0.65
SMAD6O43541 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.11■□□□□ 0.65
SMAD6O43541 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SMAD6O43541 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMAD6O43541 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD6O43541 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD6O43541 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SMAD6O43541 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
SMAD6O43541 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD6O43541 MCCD1P1-208ENST00000445732 328 ntBASIC19.1■□□□□ 0.65
SMAD6O43541 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD6O43541 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.1■□□□□ 0.65
SMAD6O43541 AL445228.2-201ENST00000605589 952 ntBASIC19.1■□□□□ 0.65
SMAD6O43541 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.1■□□□□ 0.65
SMAD6O43541 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMAD6O43541 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.1■□□□□ 0.65
SMAD6O43541 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms