Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
COCHO43405 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.59■□□□□ 0.73
COCHO43405 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.58■□□□□ 0.73
COCHO43405 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COCHO43405 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COCHO43405 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.58■□□□□ 0.72
COCHO43405 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.58■□□□□ 0.72
COCHO43405 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.58■□□□□ 0.72
COCHO43405 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.58■□□□□ 0.72
COCHO43405 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.58■□□□□ 0.72
COCHO43405 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.58■□□□□ 0.72
COCHO43405 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.58■□□□□ 0.72
COCHO43405 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COCHO43405 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COCHO43405 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COCHO43405 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 RCC2P3-201ENST00000418112 1537 ntBASIC19.57■□□□□ 0.72
COCHO43405 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.57■□□□□ 0.72
COCHO43405 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.57■□□□□ 0.72
COCHO43405 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.57■□□□□ 0.72
COCHO43405 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.57■□□□□ 0.72
COCHO43405 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COCHO43405 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COCHO43405 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
COCHO43405 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
COCHO43405 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
COCHO43405 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.56■□□□□ 0.72
COCHO43405 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.56■□□□□ 0.72
COCHO43405 AL671277.2-201ENST00000458060 996 ntBASIC19.56■□□□□ 0.72
COCHO43405 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.56■□□□□ 0.72
COCHO43405 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.56■□□□□ 0.72
COCHO43405 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.56■□□□□ 0.72
COCHO43405 AL358472.4-201ENST00000633140 710 ntBASIC19.56■□□□□ 0.72
COCHO43405 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COCHO43405 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COCHO43405 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
COCHO43405 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COCHO43405 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
COCHO43405 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.55■□□□□ 0.72
COCHO43405 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 STARP1-201ENST00000397973 869 ntBASIC19.55■□□□□ 0.72
COCHO43405 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.55■□□□□ 0.72
COCHO43405 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COCHO43405 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.55■□□□□ 0.72
COCHO43405 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COCHO43405 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 AL109659.2-201ENST00000606809 1674 ntBASIC19.55■□□□□ 0.72
COCHO43405 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COCHO43405 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
COCHO43405 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.55■□□□□ 0.72
COCHO43405 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COCHO43405 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COCHO43405 AC008556.1-201ENST00000610908 2040 ntBASIC19.54■□□□□ 0.72
COCHO43405 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
COCHO43405 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
COCHO43405 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms