Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PAX4O43316 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PAX4O43316 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PAX4O43316 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
PAX4O43316 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.54□□□□□ -0.24
PAX4O43316 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
PAX4O43316 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PAX4O43316 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.53□□□□□ -0.24
PAX4O43316 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 AF186192.3-201ENST00000583427 947 ntBASIC13.53□□□□□ -0.24
PAX4O43316 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 AC073195.1-201ENST00000607241 877 ntBASIC13.53□□□□□ -0.24
PAX4O43316 AL353708.3-201ENST00000610272 989 ntBASIC13.53□□□□□ -0.24
PAX4O43316 AL445675.2-201ENST00000620291 557 ntBASIC13.53□□□□□ -0.24
PAX4O43316 CR392000.1-201ENST00000624770 1228 ntBASIC13.53□□□□□ -0.24
PAX4O43316 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.53□□□□□ -0.24
PAX4O43316 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PAX4O43316 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PAX4O43316 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
PAX4O43316 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PAX4O43316 LINC01465-201ENST00000408887 1940 ntBASIC13.52□□□□□ -0.24
PAX4O43316 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.52□□□□□ -0.24
PAX4O43316 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.52□□□□□ -0.24
PAX4O43316 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX4O43316 AC005332.7-201ENST00000614046 2005 ntBASIC13.52□□□□□ -0.24
PAX4O43316 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PAX4O43316 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PAX4O43316 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX4O43316 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PAX4O43316 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PAX4O43316 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
PAX4O43316 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.52□□□□□ -0.25
PAX4O43316 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.52□□□□□ -0.25
PAX4O43316 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 KRT16P1-201ENST00000399124 1418 ntBASIC13.52□□□□□ -0.25
PAX4O43316 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.52□□□□□ -0.25
PAX4O43316 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PAX4O43316 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
PAX4O43316 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PAX4O43316 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX4O43316 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PAX4O43316 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.51□□□□□ -0.25
PAX4O43316 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms