Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX1O00570 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SOX1O00570 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.14■□□□□ 0.81
SOX1O00570 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.14■□□□□ 0.81
SOX1O00570 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX1O00570 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SOX1O00570 AC023274.1-201ENST00000418278 595 ntBASIC20.14■□□□□ 0.81
SOX1O00570 AL645939.2-201ENST00000427340 991 ntBASIC20.14■□□□□ 0.81
SOX1O00570 AC092910.1-201ENST00000482027 1129 ntBASIC20.14■□□□□ 0.81
SOX1O00570 RNA5SP415-201ENST00000517246 115 ntBASIC20.14■□□□□ 0.81
SOX1O00570 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.14■□□□□ 0.81
SOX1O00570 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.14■□□□□ 0.81
SOX1O00570 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.14■□□□□ 0.81
SOX1O00570 AC106028.4-201ENST00000614509 607 ntBASIC20.14■□□□□ 0.81
SOX1O00570 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX1O00570 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SOX1O00570 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX1O00570 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX1O00570 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX1O00570 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 AP001269.4-201ENST00000609611 512 ntBASIC20.13■□□□□ 0.81
SOX1O00570 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.13■□□□□ 0.81
SOX1O00570 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX1O00570 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
SOX1O00570 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX1O00570 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 AC133561.1-201ENST00000568600 2415 ntBASIC20.12■□□□□ 0.81
SOX1O00570 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SOX1O00570 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.12■□□□□ 0.81
SOX1O00570 IGHGP-201ENST00000390555 1178 ntBASIC20.12■□□□□ 0.81
SOX1O00570 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SOX1O00570 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.12■□□□□ 0.81
SOX1O00570 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 AC002347.1-201ENST00000569543 541 ntBASIC20.12■□□□□ 0.81
SOX1O00570 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.12■□□□□ 0.81
SOX1O00570 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
SOX1O00570 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SOX1O00570 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SOX1O00570 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.12■□□□□ 0.81
SOX1O00570 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SOX1O00570 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SOX1O00570 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
SOX1O00570 TREX1-205ENST00000625293 1783 ntBASIC20.11■□□□□ 0.81
SOX1O00570 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.11■□□□□ 0.81
SOX1O00570 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.11■□□□□ 0.81
SOX1O00570 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SOX1O00570 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.11■□□□□ 0.81
SOX1O00570 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.11■□□□□ 0.81
SOX1O00570 AC096582.2-201ENST00000510860 516 ntBASIC20.11■□□□□ 0.81
SOX1O00570 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.11■□□□□ 0.81
SOX1O00570 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.11■□□□□ 0.81
SOX1O00570 AC012640.2-201ENST00000561606 901 ntBASIC20.11■□□□□ 0.81
SOX1O00570 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.11■□□□□ 0.81
SOX1O00570 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.11■□□□□ 0.81
SOX1O00570 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SOX1O00570 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms