Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AL158211.5-201ENST00000623583 2518 ntBASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC036111.1-201ENST00000533973 1582 ntBASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C1QTNF3-AMACRE9PGA6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AL031133.1-201ENST00000406807 723 ntBASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AL671277.2-201ENST00000458060 996 ntBASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 GCSHP2-201ENST00000560971 527 ntBASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC141586.3-201ENST00000562166 1838 ntBASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms