Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TSPY21P-201ENST00000433481 731 ntBASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 TSPY6P-201ENST00000448518 926 ntBASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 SOX15-203ENST00000570788 1093 ntBASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 NOC2LP2-201ENST00000407594 1944 ntBASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 AC126763.1-201ENST00000552015 2118 ntBASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 PCDHB18P-201ENST00000524813 2368 ntBASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM49D1C9J1S8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 AC008687.6-201ENST00000596318 630 ntBASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM49D1C9J1S8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 TSPY23P-201ENST00000440136 739 ntBASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 AC083880.1-201ENST00000608266 535 ntBASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.96■□□□□ 0.63
TRIM49D1C9J1S8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms