Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 AC126763.1-201ENST00000552015 2118 ntBASIC16.18■□□□□ 0.18
TMEM235A6NFC5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM235A6NFC5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM235A6NFC5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 RPS2P52-201ENST00000469610 820 ntBASIC16.16■□□□□ 0.18
TMEM235A6NFC5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 MIR6821-201ENST00000617625 74 ntBASIC16.16■□□□□ 0.18
TMEM235A6NFC5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 AC006557.6-201ENST00000623071 864 ntBASIC16.16■□□□□ 0.18
TMEM235A6NFC5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM235A6NFC5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM235A6NFC5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms