Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 WIZP1-201ENST00000531444 2299 ntBASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC069152.1-201ENST00000438030 544 ntBASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC133041.1-202ENST00000642053 222 ntBASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF103-CHMP3A0A140T963 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 TEX21P-204ENST00000641479 1693 ntBASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC104771.1-201ENST00000603335 964 ntBASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC120498.8-201ENST00000614275 531 ntBASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF103-CHMP3A0A140T963 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF103-CHMP3A0A140T963 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms