Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL356280.1-201ENST00000603614 379 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 AL355297.2-201ENST00000604792 129 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 AL449363.1-201ENST00000617815 186 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.44-201ENST00000362676 108 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 RNU6-461P-201ENST00000364195 107 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 RNU6-438P-201ENST00000365561 103 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 SNORD67-201ENST00000390833 111 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 MIR1283-1-201ENST00000408494 87 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AC024067.1-201ENST00000426199 223 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 RN7SKP43-201ENST00000516173 320 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AC022616.8-201ENST00000533569 253 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AL512605.2-201ENST00000592972 256 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 AL137790.1-201ENST00000634283 177 ntBASIC3.48□□□□□ -1.85
DDX41Q9UJV9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
DDX41Q9UJV9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
DDX41Q9UJV9 AC135776.4-201ENST00000624300 1904 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX41Q9UJV9 MIR22-201ENST00000362190 85 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 RNU6-545P-201ENST00000362681 104 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 SNORD31B-201ENST00000364977 69 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 MIR95-201ENST00000385072 81 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 AC025750.2-201ENST00000442609 450 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 RPL23AP3-201ENST00000453844 468 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX41Q9UJV9 RPS29P26-201ENST00000477483 171 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX41Q9UJV9 RNU6-56P-201ENST00000516986 93 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 SNORA48.11-201ENST00000517015 89 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 SNORA31.26-201ENST00000517250 137 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX41Q9UJV9 MIR3684-201ENST00000579779 74 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 MIR3117-201ENST00000584034 78 ntBASIC3.47□□□□□ -1.85
DDX41Q9UJV9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX41Q9UJV9 RNU6-324P-201ENST00000363957 106 ntBASIC3.46□□□□□ -1.86
DDX41Q9UJV9 MIR561-201ENST00000385216 97 ntBASIC3.46□□□□□ -1.86
DDX41Q9UJV9 AL357139.1-201ENST00000407792 426 ntBASIC3.46□□□□□ -1.86
DDX41Q9UJV9 AP004217.1-201ENST00000480579 346 ntBASIC3.46□□□□□ -1.86
DDX41Q9UJV9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.46□□□□□ -1.86
DDX41Q9UJV9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
DDX41Q9UJV9 RNU6-111P-201ENST00000517179 105 ntBASIC3.46□□□□□ -1.86
DDX41Q9UJV9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX41Q9UJV9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.46□□□□□ -1.86
DDX41Q9UJV9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 MIR548B-201ENST00000385247 97 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 RNU6-220P-201ENST00000390919 107 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 RPL19P1-201ENST00000411635 428 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 AC104332.2-201ENST00000429959 156 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 HMGN2P9-201ENST00000476875 229 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 RNU4-71P-201ENST00000516258 113 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 RNU6-965P-201ENST00000516721 96 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 AP002001.1-203ENST00000534002 267 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 AC010900.2-201ENST00000604508 210 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.45□□□□□ -1.86
DDX41Q9UJV9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
DDX41Q9UJV9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 RNU6-338P-201ENST00000383888 105 ntBASIC3.44□□□□□ -1.86
DDX41Q9UJV9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 RPL39P40-201ENST00000445481 146 ntBASIC3.44□□□□□ -1.86
DDX41Q9UJV9 Z96811.1-201ENST00000445880 108 ntBASIC3.44□□□□□ -1.86
DDX41Q9UJV9 MRPS10P1-201ENST00000448483 130 ntBASIC3.44□□□□□ -1.86
DDX41Q9UJV9 RNU2-12P-201ENST00000517216 168 ntBASIC3.44□□□□□ -1.86
DDX41Q9UJV9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX41Q9UJV9 MIR627-201ENST00000384979 97 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 RNU6-907P-201ENST00000390924 102 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 U3.40-201ENST00000408706 208 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 AL139132.1-201ENST00000431587 344 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 UBBP3-201ENST00000445497 241 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 SUMO1P2-201ENST00000452524 304 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 AL139109.1-201ENST00000455491 297 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 RNU7-57P-201ENST00000459540 60 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX41Q9UJV9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX41Q9UJV9 MIR7106-201ENST00000612419 65 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.43□□□□□ -1.86
DDX41Q9UJV9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX41Q9UJV9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX41Q9UJV9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms