Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MIR548AD-201ENST00000584780 82 ntBASIC5.39□□□□□ -1.55
RNF39Q9H2S5 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 AP000550.3-201ENST00000637734 379 ntBASIC5.39□□□□□ -1.55
RNF39Q9H2S5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 AC025031.4-201ENST00000621248 3271 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 RNU6-50P-201ENST00000362356 103 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 RNU6-1237P-201ENST00000384777 107 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 MIR124-3-201ENST00000384866 87 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 AC245047.3-201ENST00000429428 127 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 RN7SL441P-201ENST00000492388 296 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 AC019176.1-201ENST00000518519 225 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 MIR4420-201ENST00000583944 77 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 DLEU2_3.2-201ENST00000612883 73 ntBASIC5.38□□□□□ -1.55
RNF39Q9H2S5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF39Q9H2S5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF39Q9H2S5 RNU6-654P-201ENST00000364373 107 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 SRIP3-201ENST00000413200 219 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 AL691482.1-201ENST00000453255 87 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 PHBP14-201ENST00000512887 367 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 MIR4330-201ENST00000579077 105 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 MIR3667-201ENST00000581025 74 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 DHX9P1-201ENST00000436565 3076 ntBASIC5.37□□□□□ -1.55
RNF39Q9H2S5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 MIRLET7C-201ENST00000362160 84 ntBASIC5.36□□□□□ -1.55
RNF39Q9H2S5 STAG3L5P-204ENST00000443759 179 ntBASIC5.36□□□□□ -1.55
RNF39Q9H2S5 AC245517.4-201ENST00000448601 281 ntBASIC5.36□□□□□ -1.55
RNF39Q9H2S5 MIR4270-201ENST00000581799 70 ntBASIC5.36□□□□□ -1.55
RNF39Q9H2S5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF39Q9H2S5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF39Q9H2S5 SALL4P2-201ENST00000423288 2910 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 RNU6-957P-201ENST00000363652 99 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 SNORA24B-201ENST00000384176 131 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF39Q9H2S5 IFNWP4-201ENST00000453148 294 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 AC093850.1-201ENST00000454121 251 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 snoU13.16-201ENST00000459350 104 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 PPP1R11P1-201ENST00000486095 376 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 AC005000.2-201ENST00000605468 310 ntBASIC5.35□□□□□ -1.55
RNF39Q9H2S5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RNF39Q9H2S5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF39Q9H2S5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF39Q9H2S5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 AC004817.4-201ENST00000602396 3625 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 SNORA59A-201ENST00000459326 152 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 RNU7-23P-201ENST00000459465 62 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 AC091042.1-201ENST00000579213 173 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 AL391358.1-201ENST00000605342 190 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 AL022401.1-201ENST00000619498 108 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 MIR6715B-201ENST00000637172 77 ntBASIC5.34□□□□□ -1.55
RNF39Q9H2S5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF39Q9H2S5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF39Q9H2S5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF39Q9H2S5 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RNF39Q9H2S5 AP001029.2-203ENST00000589795 4910 ntBASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms