Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 MIR6853-201ENST00000619642 74 ntBASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CDPF1Q6NVV7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 Y_RNA.85-201ENST00000363014 111 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 SNORA71.2-201ENST00000364941 134 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 SNORA1-201ENST00000384107 130 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AL513477.1-202ENST00000417061 214 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AC091390.1-201ENST00000433904 331 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 RN7SL807P-201ENST00000470923 297 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AC008745.1-201ENST00000604064 271 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AL121932.1-201ENST00000605542 214 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 SNORA51-201ENST00000606420 132 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 FAM27B-201ENST00000610601 213 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 U6.73-201ENST00000619194 103 ntBASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDPF1Q6NVV7 AL049781.1-201ENST00000623195 3585 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 AC021146.4-201ENST00000309229 279 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RNA5SP125-201ENST00000364843 120 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 SNORA70F-201ENST00000384142 135 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 MIR570-201ENST00000384917 97 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 MIR520G-201ENST00000385064 90 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RNA5SP332-201ENST00000391063 115 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 SNORD66.1-201ENST00000391230 76 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RN7SKP267-201ENST00000410381 285 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 CALM2P4-201ENST00000430810 426 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 SCARNA22-201ENST00000503991 125 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RNVU1-4-201ENST00000612985 164 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 MIR1248-201ENST00000629190 106 ntBASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.16□□□□□ -1.9
CDPF1Q6NVV7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CDPF1Q6NVV7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDPF1Q6NVV7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RNU6-766P-201ENST00000362478 107 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RNU6-905P-201ENST00000384434 107 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 MIR129-1-201ENST00000384972 72 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RNA5SP397-201ENST00000391323 118 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AC025750.2-201ENST00000442609 450 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RPS29P31-201ENST00000446147 164 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 NDUFA4P2-201ENST00000489989 244 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 IGLV2-34-201ENST00000490007 283 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RNU6-1096P-201ENST00000517089 102 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AL356218.2-201ENST00000605264 187 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AL591926.4-201ENST00000616895 298 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDPF1Q6NVV7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 RNA5SP191-201ENST00000362585 102 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 RNU6-888P-201ENST00000363010 101 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.348-201ENST00000365403 103 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SNORD24-201ENST00000383884 75 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SNORD12C-201ENST00000386307 89 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 RNU1-82P-201ENST00000390851 165 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 AC007064.1-201ENST00000412238 351 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 AL133162.1-201ENST00000463228 453 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 AP001486.1-201ENST00000463339 476 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 COX6CP6-201ENST00000490840 228 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 MRPS17P9-201ENST00000511924 393 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 RNA5SP490-201ENST00000517141 136 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 PRELID2P1-201ENST00000552837 301 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 AC022726.1-201ENST00000587475 207 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms