Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.98□□□□□ -2.09
LMO4P61968 MIR5695-201ENST00000579717 85 ntBASIC1.98□□□□□ -2.09
LMO4P61968 AC009779.6-201ENST00000603972 165 ntBASIC1.98□□□□□ -2.09
LMO4P61968 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.98□□□□□ -2.09
LMO4P61968 MIR6733-201ENST00000635723 61 ntBASIC1.98□□□□□ -2.09
LMO4P61968 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LMO4P61968 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LMO4P61968 RBBP8P1-201ENST00000449447 1844 ntBASIC1.98□□□□□ -2.09
LMO4P61968 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.98□□□□□ -2.09
LMO4P61968 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LMO4P61968 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LMO4P61968 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LMO4P61968 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
LMO4P61968 HAUS6P2-201ENST00000433254 2404 ntBASIC1.97□□□□□ -2.09
LMO4P61968 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LMO4P61968 Y_RNA.54-201ENST00000362766 105 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RNU6-1266P-201ENST00000362794 105 ntBASIC1.97□□□□□ -2.09
LMO4P61968 Y_RNA.277-201ENST00000364754 102 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RNU6-622P-201ENST00000384272 103 ntBASIC1.97□□□□□ -2.09
LMO4P61968 SNORD58.1-201ENST00000391313 66 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AL603908.1-201ENST00000406098 201 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.97□□□□□ -2.09
LMO4P61968 SNORD12B-201ENST00000410433 91 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RN7SKP223-201ENST00000410582 62 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RNU6-1001P-201ENST00000411265 100 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AC138623.1-201ENST00000418060 216 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AL356320.1-201ENST00000429616 163 ntBASIC1.97□□□□□ -2.09
LMO4P61968 MTND5P15-201ENST00000434246 349 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AC005002.2-201ENST00000438228 269 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.97□□□□□ -2.09
LMO4P61968 HSPE1P25-201ENST00000455484 251 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RPL30P12-201ENST00000474666 353 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RPL26P26-201ENST00000480251 434 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RN7SL499P-201ENST00000481141 276 ntBASIC1.97□□□□□ -2.09
LMO4P61968 CKS1BP2-201ENST00000497342 240 ntBASIC1.97□□□□□ -2.09
LMO4P61968 YWHAEP4-201ENST00000505390 198 ntBASIC1.97□□□□□ -2.09
LMO4P61968 SCARNA24.2-201ENST00000516968 130 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AC079598.5-201ENST00000547460 117 ntBASIC1.97□□□□□ -2.09
LMO4P61968 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.97□□□□□ -2.09
LMO4P61968 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.97□□□□□ -2.09
LMO4P61968 AC130289.1-201ENST00000577321 73 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AC090897.2-201ENST00000581715 130 ntBASIC1.97□□□□□ -2.09
LMO4P61968 MIR3124-201ENST00000582636 67 ntBASIC1.97□□□□□ -2.09
LMO4P61968 MIR4658-201ENST00000584344 65 ntBASIC1.97□□□□□ -2.09
LMO4P61968 RPS15AP11-201ENST00000594193 385 ntBASIC1.97□□□□□ -2.09
LMO4P61968 AL359198.2-201ENST00000611836 194 ntBASIC1.97□□□□□ -2.09
LMO4P61968 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
LMO4P61968 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LMO4P61968 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.96□□□□□ -2.1
LMO4P61968 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LMO4P61968 RNY1-201ENST00000364228 113 ntBASIC1.96□□□□□ -2.1
LMO4P61968 Y_RNA.274-201ENST00000364714 101 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-290P-201ENST00000365212 101 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-487P-201ENST00000365430 104 ntBASIC1.96□□□□□ -2.1
LMO4P61968 SNORD63-201ENST00000384262 68 ntBASIC1.96□□□□□ -2.1
LMO4P61968 Y_RNA.462-201ENST00000384268 102 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-541P-201ENST00000384709 110 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-159P-201ENST00000391080 106 ntBASIC1.96□□□□□ -2.1
LMO4P61968 SNORA26.3-201ENST00000391119 136 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-1140P-201ENST00000410517 106 ntBASIC1.96□□□□□ -2.1
LMO4P61968 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.96□□□□□ -2.1
LMO4P61968 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.96□□□□□ -2.1
LMO4P61968 WARS2P1-201ENST00000429678 537 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RPL39P29-201ENST00000447779 157 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.96□□□□□ -2.1
LMO4P61968 SUMO1P2-201ENST00000452524 304 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RN7SKP49-201ENST00000516675 260 ntBASIC1.96□□□□□ -2.1
LMO4P61968 RNU6-58P-201ENST00000517143 103 ntBASIC1.96□□□□□ -2.1
LMO4P61968 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.96□□□□□ -2.1
LMO4P61968 AC104984.5-201ENST00000586878 94 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AC023043.3-201ENST00000593113 385 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AL078605.1-201ENST00000603529 500 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
LMO4P61968 U2.14-201ENST00000615943 113 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AC005296.1-201ENST00000616145 209 ntBASIC1.96□□□□□ -2.1
LMO4P61968 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.96□□□□□ -2.1
LMO4P61968 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.96□□□□□ -2.1
LMO4P61968 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
LMO4P61968 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.96□□□□□ -2.1
LMO4P61968 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.96□□□□□ -2.1
LMO4P61968 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LMO4P61968 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LMO4P61968 AC092268.1-201ENST00000342691 405 ntBASIC1.95□□□□□ -2.1
LMO4P61968 Y_RNA.65-201ENST00000362846 100 ntBASIC1.95□□□□□ -2.1
LMO4P61968 SNORD114-19-201ENST00000363072 75 ntBASIC1.95□□□□□ -2.1
LMO4P61968 Y_RNA.117-201ENST00000363294 101 ntBASIC1.95□□□□□ -2.1
LMO4P61968 RNU6-1285P-201ENST00000363480 105 ntBASIC1.95□□□□□ -2.1
LMO4P61968 SNORD115-8-201ENST00000363856 82 ntBASIC1.95□□□□□ -2.1
LMO4P61968 Y_RNA.269-201ENST00000364685 89 ntBASIC1.95□□□□□ -2.1
LMO4P61968 Y_RNA.286-201ENST00000364813 102 ntBASIC1.95□□□□□ -2.1
LMO4P61968 SNORD115-38-201ENST00000365037 82 ntBASIC1.95□□□□□ -2.1
LMO4P61968 RNU6-281P-201ENST00000384212 103 ntBASIC1.95□□□□□ -2.1
LMO4P61968 MIR329-1-201ENST00000385028 80 ntBASIC1.95□□□□□ -2.1
LMO4P61968 RNU4-30P-201ENST00000410245 143 ntBASIC1.95□□□□□ -2.1
LMO4P61968 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.95□□□□□ -2.1
LMO4P61968 AC244670.1-201ENST00000436879 112 ntBASIC1.95□□□□□ -2.1
LMO4P61968 AC010095.1-201ENST00000443543 144 ntBASIC1.95□□□□□ -2.1
LMO4P61968 RNU4-71P-201ENST00000516258 113 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms