Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 RN7SL499P-201ENST00000481141 276 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 HSPE1P18-201ENST00000517602 280 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 DEFB131C-201ENST00000528817 165 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 AC018448.1-201ENST00000552843 316 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB6Q9Y5E3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC004866.1-201ENST00000411748 78 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AL390729.2-201ENST00000416137 156 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC004386.2-201ENST00000441858 148 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC140059.1-201ENST00000489238 361 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC008739.2-201ENST00000597006 317 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC141273.2-201ENST00000618989 130 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC127459.3-201ENST00000624328 466 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PCDHB6Q9Y5E3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.54-201ENST00000362766 105 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 AL033519.2-201ENST00000403958 392 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 AL603910.2-201ENST00000407268 136 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 RAB28P5-201ENST00000427490 651 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 HMGB3P17-201ENST00000504195 649 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-111P-201ENST00000517179 105 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 MIR5006-201ENST00000583027 110 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 MIR4635-201ENST00000583759 79 ntBASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHB6Q9Y5E3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 SNORA72.2-201ENST00000365028 127 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 SNORA53-201ENST00000391141 249 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 ELOCP21-201ENST00000412558 336 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 SERF1AP1-201ENST00000514575 187 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB6Q9Y5E3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PCDHB6Q9Y5E3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 RNU6-1266P-201ENST00000362794 105 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 Y_RNA.515-201ENST00000384535 112 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 Y_RNA.539-201ENST00000384635 107 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 MIR29B2-201ENST00000385055 81 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 MT-TR-201ENST00000387439 65 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 AC009237.7-201ENST00000447357 229 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 RPL23AP94-201ENST00000512518 302 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 AC006023.1-201ENST00000603944 259 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 SNORD11B-201ENST00000607707 90 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 U2.14-201ENST00000615943 113 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHB6Q9Y5E3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 Y_RNA.277-201ENST00000364754 102 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 Z98949.2-201ENST00000440996 144 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RPL23AP3-201ENST00000453844 468 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 AL139109.1-201ENST00000455491 297 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RNU6-344P-201ENST00000516635 111 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RNU2-44P-201ENST00000516795 194 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RNU2-31P-201ENST00000516954 155 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 RNU1-117P-201ENST00000517041 158 ntBASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHB6Q9Y5E3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms