Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 Y_RNA.788-201ENST00000622394 112 ntBASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 AC006971.1-201ENST00000407916 4486 ntBASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 AP003122.5-201ENST00000527668 3766 ntBASIC5.79□□□□□ -1.48
SAMD1Q6SPF0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 RNVU1-6-201ENST00000364688 164 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 RNA5SP87-201ENST00000384155 118 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 AL590139.1-201ENST00000416267 400 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 AC011753.3-201ENST00000443436 406 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 AC073073.1-201ENST00000493920 463 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 RNU6-586P-201ENST00000517265 104 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 AC096644.4-201ENST00000563417 2912 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 MIR4737-201ENST00000583979 81 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 MIR7703-201ENST00000620784 77 ntBASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SAMD1Q6SPF0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AL161912.2-201ENST00000565707 3007 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 snoU2-30.2-201ENST00000362805 70 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 Y_RNA.470-201ENST00000384307 117 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 RNU2-37P-201ENST00000410695 177 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 RNA5SP104-201ENST00000410989 118 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 RPL23AP93-201ENST00000440847 484 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AC073264.2-201ENST00000448886 166 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AL109933.2-201ENST00000452651 260 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 RNU7-45P-201ENST00000459460 63 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 RNU7-96P-201ENST00000459535 64 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 AC091042.1-201ENST00000579213 173 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 SEPT14P17-201ENST00000617978 177 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 MIR6758-201ENST00000620653 63 ntBASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SAMD1Q6SPF0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 RNA5SP388-201ENST00000362584 119 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 Y_RNA.336-201ENST00000365307 109 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 SNORD6-201ENST00000365444 73 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 AC209154.1-201ENST00000582156 337 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 MIR4762-201ENST00000585261 75 ntBASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SAMD1Q6SPF0 NEAT1-202ENST00000501122 22743 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 Y_RNA.140-201ENST00000363474 103 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 U8.11-201ENST00000384699 133 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 U8.18-201ENST00000459285 133 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 PPIAP15-201ENST00000479662 484 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 UBL5P1-201ENST00000507979 193 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 MIR1254-2-201ENST00000579553 63 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 AP005019.3-201ENST00000620418 560 ntBASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SAMD1Q6SPF0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 AC087190.4-201ENST00000574616 8334 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 RNU6-1094P-201ENST00000362416 104 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 SNORA80E-201ENST00000384744 137 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 RNU6-129P-201ENST00000391022 107 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 AL135938.1-201ENST00000443141 297 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 RPL32P34-201ENST00000486380 400 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 RNA5SP73-201ENST00000516744 108 ntBASIC5.74□□□□□ -1.49
SAMD1Q6SPF0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms