Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 Y_RNA.396-201ENST00000383949 103 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 MIR300-201ENST00000401138 83 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC096920.1-201ENST00000423991 241 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 RAB28P5-201ENST00000427490 651 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.76□□□□□ -1.97
VRK1Q99986 MIR449C-201ENST00000516047 92 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC109329.2-201ENST00000519658 482 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.76□□□□□ -1.97
VRK1Q99986 MIR5004-201ENST00000579078 107 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 AC005176.2-201ENST00000596933 147 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.76□□□□□ -1.97
VRK1Q99986 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.76□□□□□ -1.97
VRK1Q99986 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
VRK1Q99986 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VRK1Q99986 Y_RNA.84-201ENST00000363011 104 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 SNORD113-8-201ENST00000363497 74 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 U3.8-201ENST00000363675 217 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 MIR561-201ENST00000385216 97 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 MT-TW-201ENST00000387382 68 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNU2-20P-201ENST00000410425 191 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNU2-25P-201ENST00000411041 191 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNU2-32P-201ENST00000411193 191 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.75□□□□□ -1.97
VRK1Q99986 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNU7-14P-201ENST00000459331 62 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 SEPT14P8-201ENST00000508026 178 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNU6-496P-201ENST00000516145 99 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 RNA5SP341-201ENST00000516261 117 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.75□□□□□ -1.97
VRK1Q99986 AL355297.2-201ENST00000604792 129 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 SNORD113-5-201ENST00000607261 78 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 AC011373.1-201ENST00000607270 237 ntBASIC2.75□□□□□ -1.97
VRK1Q99986 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VRK1Q99986 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VRK1Q99986 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VRK1Q99986 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.75□□□□□ -1.97
VRK1Q99986 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
VRK1Q99986 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.74□□□□□ -1.97
VRK1Q99986 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 RNU1-70P-201ENST00000362618 164 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 SNORD81.1-201ENST00000363064 77 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 Y_RNA.288-201ENST00000364854 92 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 SNORD31B-201ENST00000364977 69 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 MT-TG-201ENST00000387429 68 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 RNU6-1203P-201ENST00000410703 110 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 Y_RNA.618-201ENST00000410949 107 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
VRK1Q99986 TRBVB-201ENST00000477100 408 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 RNU1-117P-201ENST00000517041 158 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.74□□□□□ -1.97
VRK1Q99986 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.74□□□□□ -1.97
VRK1Q99986 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
VRK1Q99986 AC006006.1-201ENST00000603082 144 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 AC062037.2-201ENST00000610137 73 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 MIR3674-201ENST00000636576 68 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.74□□□□□ -1.97
VRK1Q99986 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VRK1Q99986 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VRK1Q99986 AL355596.1-201ENST00000565399 3996 ntBASIC2.74□□□□□ -1.97
VRK1Q99986 RNU1-23P-201ENST00000363361 144 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 SNORD87-201ENST00000364849 89 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RNU6-1180P-201ENST00000364935 107 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RNU6-1175P-201ENST00000365200 107 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 Y_RNA.483-201ENST00000384380 101 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 MIR215-201ENST00000384858 110 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 MIR1283-1-201ENST00000408494 87 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RNA5SP475-201ENST00000410568 110 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RNU2-48P-201ENST00000410694 191 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
VRK1Q99986 RPL23AP36-201ENST00000413895 458 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.73□□□□□ -1.97
VRK1Q99986 HMGN2P9-201ENST00000476875 229 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 ATP5EP1-201ENST00000510257 156 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RN7SKP43-201ENST00000516173 320 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 RNU6-570P-201ENST00000517051 105 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.73□□□□□ -1.97
VRK1Q99986 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.73□□□□□ -1.97
VRK1Q99986 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 AC022441.3-201ENST00000605737 136 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
VRK1Q99986 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VRK1Q99986 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
VRK1Q99986 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VRK1Q99986 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VRK1Q99986 RNU4-90P-201ENST00000362773 141 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 RNU6-505P-201ENST00000384427 107 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 RPL19P1-201ENST00000411635 428 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.72□□□□□ -1.97
VRK1Q99986 TOMM22P2-201ENST00000430735 237 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 SNORD127-201ENST00000458892 86 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.72□□□□□ -1.97
VRK1Q99986 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
VRK1Q99986 AC023157.2-201ENST00000540596 141 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms