Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MIR449C-201ENST00000516047 92 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.680-201ENST00000516441 93 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 RNU6-344P-201ENST00000516635 111 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 RNU1-117P-201ENST00000517041 158 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 RNU6-586P-201ENST00000517265 104 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 DEFB108E-201ENST00000524692 240 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 AC055872.1-201ENST00000570978 278 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 AC005176.2-201ENST00000596933 147 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 SNORD11B-201ENST00000607707 90 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 SDR42E1P4-201ENST00000620894 481 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.17□□□□□ -1.9
DDX53Q86TM3 Y_RNA.286-201ENST00000364813 102 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 SNORD87-201ENST00000364849 89 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 RNU6-1175P-201ENST00000365200 107 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 Y_RNA.477-201ENST00000384352 108 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 RAB28P5-201ENST00000427490 651 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 HSPE1P25-201ENST00000455484 251 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 RPL39P38-201ENST00000467018 153 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 SNORD113-5-201ENST00000607261 78 ntBASIC3.16□□□□□ -1.9
DDX53Q86TM3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX53Q86TM3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX53Q86TM3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX53Q86TM3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
DDX53Q86TM3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
DDX53Q86TM3 AL391987.6-201ENST00000305671 199 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 SNORD81.1-201ENST00000363064 77 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNU6-379P-201ENST00000363813 104 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 Y_RNA.230-201ENST00000364348 109 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 Y_RNA.489-201ENST00000384410 101 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNU6-21P-201ENST00000384710 107 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 MIR1294-201ENST00000408503 142 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNA5SP504-201ENST00000410676 117 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNA5SP184-201ENST00000411071 108 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
DDX53Q86TM3 RN7SL20P-201ENST00000488827 297 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 SEPT14P8-201ENST00000508026 178 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNU6-1338P-201ENST00000516328 91 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNU6-107P-201ENST00000516643 102 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 RNU6-1098P-201ENST00000516772 96 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.15□□□□□ -1.91
DDX53Q86TM3 MIR4319-201ENST00000577285 85 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 MIR3128-201ENST00000581957 66 ntBASIC3.15□□□□□ -1.91
DDX53Q86TM3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DDX53Q86TM3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.15□□□□□ -1.91
DDX53Q86TM3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX53Q86TM3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX53Q86TM3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DDX53Q86TM3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
DDX53Q86TM3 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 RNU4-90P-201ENST00000362773 141 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 SNORA72.2-201ENST00000365028 127 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 Y_RNA.562-201ENST00000384695 113 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.14□□□□□ -1.91
DDX53Q86TM3 RPS23P5-201ENST00000495419 428 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 MTND1P19-201ENST00000511780 315 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 RNU5F-4P-201ENST00000516581 114 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 SCARNA24.2-201ENST00000516968 130 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 AC068205.3-201ENST00000636385 468 ntBASIC3.14□□□□□ -1.91
DDX53Q86TM3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX53Q86TM3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX53Q86TM3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC062016.1-201ENST00000355719 319 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 RNU6-290P-201ENST00000365212 101 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 RNU6-1318P-201ENST00000365389 103 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 FO393413.1-201ENST00000402892 195 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC108059.2-201ENST00000434626 151 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 RPL23AP3-201ENST00000453844 468 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 RNU6-388P-201ENST00000517012 105 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 RNU6-389P-201ENST00000517048 105 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AP002001.1-203ENST00000534002 267 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 RPL17P51-201ENST00000605218 238 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC013412.1-201ENST00000610687 192 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 AC004467.1-201ENST00000615678 330 ntBASIC3.13□□□□□ -1.91
DDX53Q86TM3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX53Q86TM3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX53Q86TM3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX53Q86TM3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX53Q86TM3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX53Q86TM3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms