Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-407P-201ENST00000365280 104 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-728P-201ENST00000365375 104 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-1027P-201ENST00000383998 107 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-1154P-201ENST00000391001 104 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 AL606845.1-201ENST00000404881 255 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-257P-201ENST00000410238 98 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 SNORA36B-201ENST00000410438 131 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 AC006461.1-201ENST00000412637 326 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.67□□□□□ -1.82
PDGFAP04085 AL137159.1-201ENST00000452808 512 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 SNORD65B-201ENST00000459126 73 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RPL36AP21-201ENST00000490372 323 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFAP04085 ATP5EP1-201ENST00000510257 156 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU6-948P-201ENST00000516374 107 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNU7-116P-201ENST00000516940 62 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 RNA5SP179-201ENST00000517284 121 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 CYCSP30-201ENST00000546447 172 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 AC091167.4-201ENST00000605079 184 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 AC002064.3-201ENST00000623448 346 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 MIR7157-201ENST00000635801 60 ntBASIC3.67□□□□□ -1.82
PDGFAP04085 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFAP04085 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 AC010332.2-201ENST00000613083 1904 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFAP04085 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFAP04085 RNU6-1323P-201ENST00000384025 107 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 MIR15B-201ENST00000385045 98 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 MIR483-201ENST00000385070 76 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 SNORA40-201ENST00000388090 126 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 AC010154.1-201ENST00000425857 269 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 MICF-203ENST00000432679 129 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 RPS12P18-201ENST00000442381 270 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 RAC1P5-201ENST00000512182 576 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 YPEL5P3-201ENST00000547227 352 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 AP003357.1-201ENST00000604497 148 ntBASIC3.66□□□□□ -1.82
PDGFAP04085 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFAP04085 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFAP04085 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.65□□□□□ -1.82
PDGFAP04085 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
PDGFAP04085 RNU1-72P-201ENST00000362976 153 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 RNU6-438P-201ENST00000365561 103 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 RNU6-643P-201ENST00000384018 107 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 MIR491-201ENST00000384877 84 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 MIR591-201ENST00000385290 95 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 MT-TT-201ENST00000387460 66 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 AC008134.1-201ENST00000420943 193 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 SNORA25.12-201ENST00000516202 82 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 SNORA74D-201ENST00000516404 141 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 RNU7-143P-201ENST00000516781 65 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 SCARNA14-201ENST00000516903 136 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 AC005972.2-201ENST00000604690 348 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 AC107294.3-201ENST00000609211 526 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 AC006435.5-201ENST00000624486 112 ntBASIC3.65□□□□□ -1.83
PDGFAP04085 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFAP04085 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFAP04085 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.64□□□□□ -1.83
PDGFAP04085 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 RNA5SP399-201ENST00000364003 117 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 RNY3P5-201ENST00000384127 102 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 SNORD116-13-201ENST00000384408 92 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 U6atac.2-201ENST00000408644 118 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 RNU6-383P-201ENST00000410864 94 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AC126124.2-201ENST00000413542 321 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 RPL30P4-201ENST00000429309 333 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFAP04085 AC016717.1-201ENST00000448918 286 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AC016925.1-201ENST00000458303 298 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFAP04085 RNA5SP20-201ENST00000515976 84 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 SCARNA13-201ENST00000516672 275 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AC127455.1-201ENST00000565496 145 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 MIR3922-201ENST00000585192 84 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 POLR3GP1-201ENST00000594073 261 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFAP04085 MIR3658-201ENST00000636291 56 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFAP04085 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFAP04085 AC100821.1-201ENST00000523153 2479 ntBASIC3.64□□□□□ -1.83
PDGFAP04085 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFAP04085 MAPK10-322ENST00000641485 4530 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 RNU6-1235P-201ENST00000384559 107 ntBASIC3.63□□□□□ -1.83
PDGFAP04085 MIR34B-201ENST00000385076 84 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms