Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AL353813.1-201ENST00000440700 253 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 RPL36AP48-201ENST00000485521 314 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SCARNA22-201ENST00000503991 125 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SNORA74D-201ENST00000516404 141 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.51□□□□□ -1.69
LHX6Q9UPM6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX6Q9UPM6 AL450345.1-202ENST00000605741 3881 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 MIR607-201ENST00000385241 96 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 SNRPGP5-201ENST00000456003 220 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 snoU13.28-201ENST00000459235 104 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 AC078918.1-201ENST00000498515 228 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 AC006349.1-201ENST00000555526 235 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 AC040958.1-201ENST00000561102 201 ntBASIC4.5□□□□□ -1.69
LHX6Q9UPM6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX6Q9UPM6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 RNU6-633P-201ENST00000362612 103 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.351-201ENST00000365436 96 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 SNORD58A-201ENST00000383875 65 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 MIR491-201ENST00000384877 84 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 RNU6-679P-201ENST00000391003 106 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 RNA5SP129-201ENST00000410276 118 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 COX5BP7-201ENST00000414780 274 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 RN7SL176P-201ENST00000580352 264 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 MIR4712-201ENST00000583750 82 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 AC145423.2-201ENST00000610631 239 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 AC006441.5-201ENST00000612680 209 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 AC019206.1-201ENST00000621938 425 ntBASIC4.49□□□□□ -1.69
LHX6Q9UPM6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LHX6Q9UPM6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 MIR7-3-201ENST00000384898 110 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 RPS29P17-201ENST00000430795 166 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC233266.1-201ENST00000454518 96 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC073073.1-201ENST00000493920 463 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 SNORD36C-201ENST00000516733 66 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC233702.9-201ENST00000581528 203 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 MIR4439-201ENST00000583746 80 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC242852.1-201ENST00000612151 96 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC244015.1-201ENST00000622301 99 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC091932.4-201ENST00000623386 200 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 MIR492-201ENST00000638676 116 ntBASIC4.48□□□□□ -1.69
LHX6Q9UPM6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.48□□□□□ -1.69
LHX6Q9UPM6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 Y_RNA.430-201ENST00000384081 110 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 MIR449B-201ENST00000384995 97 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 MIR802-201ENST00000390235 94 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 RNU11-5P-201ENST00000391216 129 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 U3.32-201ENST00000408116 212 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 DBIP2-201ENST00000419076 262 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 AL356387.2-201ENST00000422272 243 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 AC006445.1-201ENST00000491925 405 ntBASIC4.47□□□□□ -1.69
LHX6Q9UPM6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX6Q9UPM6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms