Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX5Q8N196 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SIX5Q8N196 AL513302.2-201ENST00000562313 1842 ntBASIC4.04□□□□□ -1.76
SIX5Q8N196 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX5Q8N196 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX5Q8N196 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX5Q8N196 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SIX5Q8N196 AC100821.1-201ENST00000523153 2479 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-1290P-201ENST00000362957 109 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-818P-201ENST00000364837 108 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-1083P-201ENST00000384022 107 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 MIR518C-201ENST00000384822 101 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX5Q8N196 Z98941.1-201ENST00000407764 100 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 MIR1283-1-201ENST00000408494 87 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-257P-201ENST00000410238 98 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RPS4XP2-201ENST00000458402 793 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 AL133162.1-201ENST00000463228 453 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RPS27P26-201ENST00000494583 239 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-453P-201ENST00000516819 85 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 RNU6-711P-201ENST00000517255 106 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX5Q8N196 MIR4474-201ENST00000579189 78 ntBASIC4.03□□□□□ -1.76
SIX5Q8N196 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SIX5Q8N196 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SIX5Q8N196 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX5Q8N196 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.03□□□□□ -1.77
SIX5Q8N196 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SIX5Q8N196 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 RNU6-486P-201ENST00000363116 107 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SIX5Q8N196 SNORD37.2-201ENST00000391075 66 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 MIR873-201ENST00000401120 77 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 AC008267.6-201ENST00000441664 139 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 BX510359.1-201ENST00000456973 237 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 RNU7-57P-201ENST00000459540 60 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 AC006445.1-201ENST00000491925 405 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 RN7SKP18-201ENST00000516005 275 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 RNU7-143P-201ENST00000516781 65 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX5Q8N196 AC068647.2-201ENST00000637380 353 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SIX5Q8N196 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX5Q8N196 AC068700.1-201ENST00000565862 3754 ntBASIC4.02□□□□□ -1.77
SIX5Q8N196 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
SIX5Q8N196 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX5Q8N196 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SIX5Q8N196 SNORD114-7-201ENST00000362520 77 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 RNU6-271P-201ENST00000363858 105 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 RNU6-1168P-201ENST00000390831 104 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 RPL23AP7-203ENST00000449021 469 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 CENPBD1P1-201ENST00000464061 469 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 SCARNA8-201ENST00000515924 131 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 MIR449C-201ENST00000516047 92 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 MIR548AY-201ENST00000617669 107 ntBASIC4.01□□□□□ -1.77
SIX5Q8N196 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX5Q8N196 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX5Q8N196 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX5Q8N196 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4□□□□□ -1.77
SIX5Q8N196 Y_RNA.229-201ENST00000364347 113 ntBASIC4□□□□□ -1.77
SIX5Q8N196 SNORA22C-201ENST00000384614 134 ntBASIC4□□□□□ -1.77
SIX5Q8N196 MIR15B-201ENST00000385045 98 ntBASIC4□□□□□ -1.77
SIX5Q8N196 AL139095.1-201ENST00000404326 391 ntBASIC4□□□□□ -1.77
SIX5Q8N196 RNU6-735P-201ENST00000410612 107 ntBASIC4□□□□□ -1.77
SIX5Q8N196 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4□□□□□ -1.77
SIX5Q8N196 HLA-N-201ENST00000437516 135 ntBASIC4□□□□□ -1.77
SIX5Q8N196 AL137159.1-201ENST00000452808 512 ntBASIC4□□□□□ -1.77
SIX5Q8N196 RNU7-170P-201ENST00000459303 61 ntBASIC4□□□□□ -1.77
SIX5Q8N196 AC117454.1-201ENST00000491120 168 ntBASIC4□□□□□ -1.77
SIX5Q8N196 AC090877.1-201ENST00000561418 344 ntBASIC4□□□□□ -1.77
SIX5Q8N196 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
SIX5Q8N196 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4□□□□□ -1.77
SIX5Q8N196 AL365222.1-201ENST00000614661 98 ntBASIC4□□□□□ -1.77
SIX5Q8N196 MIR3651-201ENST00000630427 90 ntBASIC4□□□□□ -1.77
SIX5Q8N196 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX5Q8N196 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX5Q8N196 ZNF962P-201ENST00000443465 3140 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
SIX5Q8N196 Y_RNA.124-201ENST00000363339 93 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 RNU6-728P-201ENST00000365375 104 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 RNU6-643P-201ENST00000384018 107 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 RNU6-1228P-201ENST00000391014 107 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX5Q8N196 AL121890.1-201ENST00000435457 205 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.99□□□□□ -1.77
SIX5Q8N196 snoZ196.1-201ENST00000625269 89 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 MIR3658-201ENST00000636291 56 ntBASIC3.99□□□□□ -1.77
SIX5Q8N196 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SIX5Q8N196 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms