Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH1Q08174 AL513302.2-201ENST00000562313 1842 ntBASIC3.63□□□□□ -1.83
PCDH1Q08174 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH1Q08174 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
PCDH1Q08174 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH1Q08174 MIR367-201ENST00000362299 68 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 SNORD114-7-201ENST00000362520 77 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 Y_RNA.172-201ENST00000363765 102 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 Y_RNA.229-201ENST00000364347 113 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 Y_RNA.261-201ENST00000364631 102 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 SNORA51.4-201ENST00000364993 124 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RNU6-643P-201ENST00000384018 107 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 MIR15B-201ENST00000385045 98 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 MT-TT-201ENST00000387460 66 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 AP000567.1-201ENST00000406413 156 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 EIF4EP4-201ENST00000424916 578 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 Z98742.2-201ENST00000431564 187 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 HSPE1P21-201ENST00000438283 308 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 HMGN2P9-201ENST00000476875 229 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RNU5F-4P-201ENST00000516581 114 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RNU6-1098P-201ENST00000516772 96 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH1Q08174 AC112693.2-201ENST00000556538 232 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH1Q08174 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDH1Q08174 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDH1Q08174 AC008739.2-201ENST00000597006 317 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 AL354798.1-201ENST00000622505 329 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDH1Q08174 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDH1Q08174 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH1Q08174 AL161912.2-201ENST00000565707 3007 ntBASIC3.62□□□□□ -1.83
PCDH1Q08174 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH1Q08174 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDH1Q08174 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH1Q08174 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH1Q08174 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH1Q08174 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH1Q08174 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH1Q08174 Y_RNA.124-201ENST00000363339 93 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 Y_RNA.127-201ENST00000363386 109 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 Y_RNA.218-201ENST00000364218 104 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 MIR554-201ENST00000384874 96 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 RNU6-1228P-201ENST00000391014 107 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 RN7SKP202-201ENST00000410439 330 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 AC023632.4-201ENST00000517783 191 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 AC034105.4-201ENST00000568304 277 ntBASIC3.61□□□□□ -1.83
PCDH1Q08174 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDH1Q08174 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH1Q08174 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH1Q08174 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDH1Q08174 U8.7-201ENST00000364940 136 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 SNORA62.3-201ENST00000365110 153 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 RNU6-407P-201ENST00000365280 104 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 MIR539-201ENST00000365690 78 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PCDH1Q08174 Y_RNA.420-201ENST00000384043 110 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 MIR29B2-201ENST00000385055 81 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 MIR767-201ENST00000390228 109 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 SNORD37.2-201ENST00000391075 66 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 MIR873-201ENST00000401120 77 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AL606845.1-201ENST00000404881 255 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 RPL23AP7-203ENST00000449021 469 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AL133162.1-201ENST00000463228 453 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 CENPBD1P1-201ENST00000464061 469 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 RNU6-1333P-201ENST00000516162 93 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 RN7SKP83-201ENST00000516512 178 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDH1Q08174 RPL30P11-203ENST00000598995 310 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 MIR548AY-201ENST00000617669 107 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AL136164.4-201ENST00000625013 2135 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 AC006504.1-201ENST00000562493 3666 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.6□□□□□ -1.83
PCDH1Q08174 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
PCDH1Q08174 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH1Q08174 Y_RNA.71-201ENST00000362892 104 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 Y_RNA.273-201ENST00000364703 102 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 AL139095.1-201ENST00000404326 391 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 RNU6-1077P-201ENST00000410506 102 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH1Q08174 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 RN7SL703P-201ENST00000578485 302 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 LARP7P3-201ENST00000579888 337 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 AL359881.1-201ENST00000602916 267 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 AC068647.2-201ENST00000637380 353 ntBASIC3.59□□□□□ -1.83
PCDH1Q08174 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH1Q08174 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PCDH1Q08174 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDH1Q08174 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH1Q08174 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms