Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 HMGN1P10-201ENST00000474557 553 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 AC010655.3-201ENST00000478818 450 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 SNORA40.9-201ENST00000515895 93 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 RNU6-397P-201ENST00000516226 104 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 RNU1-117P-201ENST00000517041 158 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 AC109329.2-201ENST00000519658 482 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 RRN3P3-201ENST00000549207 578 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.41□□□□□ -1.86
ATP2B1P20020 RAC1P9-201ENST00000604990 392 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 MIR1248-201ENST00000629190 106 ntBASIC3.41□□□□□ -1.86
ATP2B1P20020 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
ATP2B1P20020 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.41□□□□□ -1.86
ATP2B1P20020 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2B1P20020 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2B1P20020 AL365361.1-201ENST00000566942 3481 ntBASIC3.4□□□□□ -1.86
ATP2B1P20020 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATP2B1P20020 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
ATP2B1P20020 AL161431.1-201ENST00000618966 4205 ntBASIC3.4□□□□□ -1.86
ATP2B1P20020 RNU6-1026P-201ENST00000384465 108 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 RNU6-1105P-201ENST00000384774 107 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 RPL39P40-201ENST00000445481 146 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2B1P20020 AC074133.1-201ENST00000515696 183 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.4□□□□□ -1.87
ATP2B1P20020 AC008269.2-201ENST00000561915 1105 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 MIR4325-201ENST00000583049 90 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 AL357075.2-201ENST00000614906 189 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 AC068205.3-201ENST00000636385 468 ntBASIC3.4□□□□□ -1.87
ATP2B1P20020 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2B1P20020 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.39□□□□□ -1.87
ATP2B1P20020 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATP2B1P20020 RNU6-1309P-201ENST00000363305 108 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 Y_RNA.415-201ENST00000384012 112 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 RNU6-611P-201ENST00000384276 104 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATP2B1P20020 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2B1P20020 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2B1P20020 SNORA40.15-201ENST00000516884 107 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 RNU6-897P-201ENST00000517135 105 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.39□□□□□ -1.87
ATP2B1P20020 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.39□□□□□ -1.87
ATP2B1P20020 U4atac.1-201ENST00000618345 95 ntBASIC3.39□□□□□ -1.87
ATP2B1P20020 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ATP2B1P20020 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
ATP2B1P20020 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ATP2B1P20020 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ATP2B1P20020 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATP2B1P20020 RNU6-743P-201ENST00000364151 106 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 Y_RNA.498-201ENST00000384460 102 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 MIR548F4-201ENST00000408515 105 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 RNU6-130P-201ENST00000411112 103 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.38□□□□□ -1.87
ATP2B1P20020 RNU6-408P-201ENST00000515910 100 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 RN7SKP43-201ENST00000516173 320 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 RNU6-635P-201ENST00000516651 102 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 AP002404.1-201ENST00000532005 451 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 AC233702.2-202ENST00000562547 291 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 PRR13P7-201ENST00000605538 430 ntBASIC3.38□□□□□ -1.87
ATP2B1P20020 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2B1P20020 Y_RNA.183-201ENST00000363882 113 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 Y_RNA.276-201ENST00000364732 109 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 MIR300-201ENST00000401138 83 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 AL079342.1-201ENST00000401460 267 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 AL357139.1-201ENST00000407792 426 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2B1P20020 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.37□□□□□ -1.87
ATP2B1P20020 AC018448.1-201ENST00000552843 316 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 MAPK10-266ENST00000641066 6555 ntBASIC3.37□□□□□ -1.87
ATP2B1P20020 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATP2B1P20020 AC108206.1-201ENST00000570186 4159 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU6-545P-201ENST00000362681 104 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 Y_RNA.133-201ENST00000363428 110 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 Y_RNA.176-201ENST00000363815 109 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 Y_RNA.214-201ENST00000364201 112 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU6-1305P-201ENST00000364353 104 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 SNORD87-201ENST00000364849 89 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 SNORD31B-201ENST00000364977 69 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 SNORA25B-201ENST00000365507 128 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU6-438P-201ENST00000365561 103 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 SNORA67.2-201ENST00000384300 149 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU6-1109P-201ENST00000391187 107 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2B1P20020 MTND3P2-201ENST00000438452 342 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.36□□□□□ -1.87
ATP2B1P20020 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 AC009238.1-201ENST00000442165 424 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 AC009237.6-201ENST00000446969 424 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 HMGN2P18-201ENST00000450680 270 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU7-26P-201ENST00000458980 63 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNU6-625P-201ENST00000459412 107 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RPL26P26-201ENST00000480251 434 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 AC018868.1-201ENST00000491307 315 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 ATP5EP1-201ENST00000510257 156 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.36□□□□□ -1.87
ATP2B1P20020 SCGB1D5P-201ENST00000515134 247 ntBASIC3.36□□□□□ -1.87
ATP2B1P20020 RNY3P15-201ENST00000516297 97 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms