Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AL049861.1-201ENST00000603130 150 ntBASIC3.22□□□□□ -1.89
U3KQE9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.22□□□□□ -1.89
U3KQE9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
U3KQE9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
U3KQE9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
U3KQE9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.22□□□□□ -1.89
U3KQE9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
U3KQE9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
U3KQE9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
U3KQE9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
U3KQE9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
U3KQE9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 Y_RNA.35-201ENST00000362601 101 ntBASIC3.21□□□□□ -1.9
U3KQE9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.21□□□□□ -1.9
U3KQE9 RNA5SP447-201ENST00000363749 119 ntBASIC3.21□□□□□ -1.9
U3KQE9 SNORA37-201ENST00000384504 129 ntBASIC3.21□□□□□ -1.9
U3KQE9 HMGN2P8-201ENST00000391458 268 ntBASIC3.21□□□□□ -1.9
U3KQE9 AL031737.1-201ENST00000450125 223 ntBASIC3.21□□□□□ -1.9
U3KQE9 RPL21P10-201ENST00000463521 490 ntBASIC3.21□□□□□ -1.9
U3KQE9 RPS29P24-201ENST00000486345 171 ntBASIC3.21□□□□□ -1.9
U3KQE9 RNA5SP112-201ENST00000515937 99 ntBASIC3.21□□□□□ -1.9
U3KQE9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.21□□□□□ -1.9
U3KQE9 RNU6-412P-201ENST00000516434 106 ntBASIC3.21□□□□□ -1.9
U3KQE9 RNA5SP49-201ENST00000516450 115 ntBASIC3.21□□□□□ -1.9
U3KQE9 AL365205.2-201ENST00000594586 68 ntBASIC3.21□□□□□ -1.9
U3KQE9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
U3KQE9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
U3KQE9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.2□□□□□ -1.9
U3KQE9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
U3KQE9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 MIR448-201ENST00000362131 111 ntBASIC3.2□□□□□ -1.9
U3KQE9 RNU1-105P-201ENST00000363470 161 ntBASIC3.2□□□□□ -1.9
U3KQE9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.2□□□□□ -1.9
U3KQE9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.2□□□□□ -1.9
U3KQE9 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
U3KQE9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
U3KQE9 MIR1302-4-201ENST00000408701 150 ntBASIC3.2□□□□□ -1.9
U3KQE9 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
U3KQE9 RNA5SP127-201ENST00000411051 133 ntBASIC3.2□□□□□ -1.9
U3KQE9 Y_RNA.630-201ENST00000411370 108 ntBASIC3.2□□□□□ -1.9
U3KQE9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.2□□□□□ -1.9
U3KQE9 SNRPGP5-201ENST00000456003 220 ntBASIC3.2□□□□□ -1.9
U3KQE9 snoU13.1-201ENST00000459157 104 ntBASIC3.2□□□□□ -1.9
U3KQE9 RPS29P19-201ENST00000479709 171 ntBASIC3.2□□□□□ -1.9
U3KQE9 AC025554.1-201ENST00000505641 188 ntBASIC3.2□□□□□ -1.9
U3KQE9 AC109329.2-201ENST00000519658 482 ntBASIC3.2□□□□□ -1.9
U3KQE9 AC018630.3-201ENST00000542637 96 ntBASIC3.2□□□□□ -1.9
U3KQE9 AL356218.2-201ENST00000605264 187 ntBASIC3.2□□□□□ -1.9
U3KQE9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.2□□□□□ -1.9
U3KQE9 AP000346.3-201ENST00000622821 210 ntBASIC3.2□□□□□ -1.9
U3KQE9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
U3KQE9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
U3KQE9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
U3KQE9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
U3KQE9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.2□□□□□ -1.9
U3KQE9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
U3KQE9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
U3KQE9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.19□□□□□ -1.9
U3KQE9 SNORD74.4-201ENST00000364129 80 ntBASIC3.19□□□□□ -1.9
U3KQE9 RNU1-132P-201ENST00000364300 164 ntBASIC3.19□□□□□ -1.9
U3KQE9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.19□□□□□ -1.9
U3KQE9 MIR891A-201ENST00000401237 79 ntBASIC3.19□□□□□ -1.9
U3KQE9 RNU6-57P-201ENST00000411348 103 ntBASIC3.19□□□□□ -1.9
U3KQE9 CYCSP49-201ENST00000420810 319 ntBASIC3.19□□□□□ -1.9
U3KQE9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.19□□□□□ -1.9
U3KQE9 AC245102.2-201ENST00000448956 180 ntBASIC3.19□□□□□ -1.9
U3KQE9 Y_RNA.649-201ENST00000459077 103 ntBASIC3.19□□□□□ -1.9
U3KQE9 SNORD11-201ENST00000459124 84 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC010469.1-201ENST00000463864 576 ntBASIC3.19□□□□□ -1.9
U3KQE9 RPL27AP5-201ENST00000469428 449 ntBASIC3.19□□□□□ -1.9
U3KQE9 RN7SL303P-201ENST00000469773 251 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC109327.1-201ENST00000471666 403 ntBASIC3.19□□□□□ -1.9
U3KQE9 RNA5SP519-201ENST00000516480 119 ntBASIC3.19□□□□□ -1.9
U3KQE9 RNU2-60P-201ENST00000517290 128 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC025647.1-201ENST00000517879 253 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.19□□□□□ -1.9
U3KQE9 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
U3KQE9 AC039056.2-201ENST00000622261 511 ntBASIC3.19□□□□□ -1.9
U3KQE9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
U3KQE9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
U3KQE9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
U3KQE9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.18□□□□□ -1.9
U3KQE9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms