Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNU6-344P-201ENST00000516635 111 ntBASIC3□□□□□ -1.93
CCM2LQ9NUG4 DEFB131C-201ENST00000528817 165 ntBASIC3□□□□□ -1.93
CCM2LQ9NUG4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3□□□□□ -1.93
CCM2LQ9NUG4 SNORD11B-201ENST00000607707 90 ntBASIC3□□□□□ -1.93
CCM2LQ9NUG4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3□□□□□ -1.93
CCM2LQ9NUG4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3□□□□□ -1.93
CCM2LQ9NUG4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCM2LQ9NUG4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCM2LQ9NUG4 RNU6-238P-201ENST00000363313 106 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 RNU6-220P-201ENST00000390919 107 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 RN7SKP284-201ENST00000411002 343 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AL161788.1-201ENST00000441805 169 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 UQCRBP2-201ENST00000447827 297 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AC074133.1-201ENST00000515696 183 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 SNORA40.9-201ENST00000515895 93 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 RNY3P15-201ENST00000516297 97 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AC023043.3-201ENST00000593113 385 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AC011476.5-201ENST00000615594 130 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AL449363.1-201ENST00000617815 186 ntBASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCM2LQ9NUG4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 RNU6-944P-201ENST00000364023 107 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 RNU6-26P-201ENST00000383985 107 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 MIR95-201ENST00000385072 81 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AL079342.1-201ENST00000401460 267 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 ELOCP20-201ENST00000422460 345 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 PCNPP5-201ENST00000452246 481 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AC090515.1-201ENST00000465295 476 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 RNU2-44P-201ENST00000516795 194 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 SNORA48.11-201ENST00000517015 89 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 MIR3117-201ENST00000584034 78 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 MZT1P2-201ENST00000604387 248 ntBASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCM2LQ9NUG4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 RNU6-770P-201ENST00000363929 105 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AC025465.3-201ENST00000510570 311 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AL161670.1-201ENST00000554348 137 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 MIR5004-201ENST00000579078 107 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 MIR376A1-201ENST00000616574 68 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 AC093010.3-201ENST00000570269 15214 ntBASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCM2LQ9NUG4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 RNU6-727P-201ENST00000363592 107 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 SNORA5B-201ENST00000363786 132 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 MIR568-201ENST00000385036 95 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AL033519.2-201ENST00000403958 392 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC004866.1-201ENST00000411748 78 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC025750.2-201ENST00000442609 450 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 RPL26P26-201ENST00000480251 434 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 RPS23P5-201ENST00000495419 428 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC091826.1-201ENST00000514065 313 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC233702.2-202ENST00000562547 291 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 MIR4276-201ENST00000584832 70 ntBASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCM2LQ9NUG4 LINC02555-201ENST00000563933 1951 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 Y_RNA.452-201ENST00000384202 108 ntBASIC2.95□□□□□ -1.94
CCM2LQ9NUG4 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms