Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORD35A-201ENST00000363389 86 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP355-201ENST00000365317 135 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORD115-44-201ENST00000365391 82 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR433-201ENST00000384837 93 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORD116.2-201ENST00000391251 93 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SKP281-201ENST00000410472 352 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 MICG-208ENST00000416822 132 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AHCYP8-201ENST00000425108 209 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC245884.2-201ENST00000426257 404 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC099513.1-201ENST00000490423 301 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC138907.6-201ENST00000568401 126 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC138869.1-201ENST00000568623 124 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 LINC00901.1-201ENST00000617252 152 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR6085-201ENST00000618314 110 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 AC110079.1-202ENST00000635213 138 ntBASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP3-3Q9BYR6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
KRTAP3-3Q9BYR6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 RNA5SP382-201ENST00000363355 112 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 RNA5SP35-201ENST00000391257 129 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR1231-201ENST00000408101 92 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 PPIAP23-201ENST00000420099 497 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 BX510359.4-201ENST00000423750 193 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 VPS25P1-201ENST00000455691 508 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 AC021146.9-201ENST00000512503 156 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR4258-201ENST00000580920 91 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR3187-201ENST00000583431 70 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 TP53TG1_2.1-201ENST00000611226 182 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR6732-201ENST00000619365 60 ntBASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KRTAP3-3Q9BYR6 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PRNCR1-201ENST00000635449 12727 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 RNU1-36P-201ENST00000365130 165 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 AL157398.1-201ENST00000452981 186 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 snoU13.29-201ENST00000459370 104 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 MIR4312-201ENST00000579909 76 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 AC005514.1-201ENST00000623521 208 ntBASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KRTAP3-3Q9BYR6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms