Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HOXC12P31275 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC12P31275 RNU6-324P-201ENST00000363957 106 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 RNU6-454P-201ENST00000364292 107 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 RNY4P28-201ENST00000365281 93 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC12P31275 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC12P31275 RNU5F-4P-201ENST00000516581 114 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 SCARNA11.3-201ENST00000517276 130 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 AC024405.2-202ENST00000532731 184 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.28□□□□□ -1.88
HOXC12P31275 DEFB117-201ENST00000602356 141 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 RPL17P51-201ENST00000605218 238 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 AC005828.6-201ENST00000606610 232 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.28□□□□□ -1.88
HOXC12P31275 MIR3651-201ENST00000630427 90 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 MIR7515-201ENST00000637837 67 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
HOXC12P31275 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXC12P31275 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HOXC12P31275 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 AL049781.1-201ENST00000623195 3585 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 MIR411-201ENST00000362239 96 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 Y_RNA.150-201ENST00000363562 102 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 SNORD32B-201ENST00000364460 84 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 Y_RNA.270-201ENST00000364693 104 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 RNA5SP267-201ENST00000364893 126 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 Y_RNA.329-201ENST00000365209 107 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 MIR218-1-201ENST00000384999 110 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 SUMO1P2-201ENST00000452524 304 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC12P31275 Y_RNA.638-201ENST00000459374 113 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 RN7SL601P-201ENST00000471221 293 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 RAC1P2-201ENST00000511164 579 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 MIR449C-201ENST00000516047 92 ntBASIC3.27□□□□□ -1.89
HOXC12P31275 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HOXC12P31275 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXC12P31275 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC12P31275 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC12P31275 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC12P31275 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC12P31275 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.82-201ENST00000363000 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.92-201ENST00000363043 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 RNU6-1305P-201ENST00000364353 104 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.235-201ENST00000364412 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.306-201ENST00000365015 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.312-201ENST00000365089 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.322-201ENST00000365151 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 AC002075.2-201ENST00000425207 252 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC12P31275 RPL23AP58-201ENST00000440453 469 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 BX510359.1-201ENST00000456973 237 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.650-201ENST00000459002 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 RNA5SP208-201ENST00000516156 78 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 RNU6-191P-201ENST00000516295 94 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 RNU6-1098P-201ENST00000516772 96 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.777-201ENST00000516982 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 RN7SKP57-201ENST00000517248 293 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC12P31275 MIR4282-201ENST00000583613 67 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.771-201ENST00000598668 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 FTX_2.1-201ENST00000618816 94 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 Y_RNA.789-201ENST00000622480 102 ntBASIC3.26□□□□□ -1.89
HOXC12P31275 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
HOXC12P31275 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC12P31275 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXC12P31275 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HOXC12P31275 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HOXC12P31275 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXC12P31275 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC12P31275 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXC12P31275 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 SNORA67.2-201ENST00000384300 149 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 Y_RNA.555-201ENST00000384673 110 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 AL603908.1-201ENST00000406098 201 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 MIR1294-201ENST00000408503 142 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 U3.40-201ENST00000408706 208 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 RNU6-1328P-201ENST00000410938 106 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC12P31275 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 COX6CP14-201ENST00000469580 174 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 TRBV12-2-201ENST00000489763 344 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 RNU6-436P-201ENST00000516171 114 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 RNU2-12P-201ENST00000517216 168 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 SNORA62.6-201ENST00000606322 83 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms