Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 MIR16-2-201ENST00000362117 81 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RNU6-361P-201ENST00000364454 107 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 SNRPEP2-201ENST00000397592 279 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AL023807.1-201ENST00000407932 359 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 MIR548P-201ENST00000408336 84 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RNU6-321P-201ENST00000410912 106 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RN7SKP167-201ENST00000411047 285 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 CYCSP46-201ENST00000423569 204 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AL353813.1-201ENST00000440700 253 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AL137792.2-201ENST00000443484 235 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RPS15AP29-201ENST00000445539 400 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AC015908.1-201ENST00000478739 476 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RPL21P99-201ENST00000480369 423 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 TRBVA-201ENST00000498804 316 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RAC1P2-201ENST00000511164 579 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.688-201ENST00000516565 95 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 AC004024.1-201ENST00000549244 247 ntBASIC1.1□□□□□ -2.23
HMCN1Q96RW7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMCN1Q96RW7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU4-35P-201ENST00000362588 141 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-942P-201ENST00000363002 107 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-681P-201ENST00000364012 104 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-895P-201ENST00000384125 103 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-985P-201ENST00000410182 104 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL23AP4-201ENST00000427757 463 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL30P4-201ENST00000429309 333 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL7P31-201ENST00000450192 724 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 U3.44-201ENST00000458938 192 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL30P5-201ENST00000494923 336 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 MLLT10P2-201ENST00000506434 249 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-303P-201ENST00000517091 106 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 IGKV2-36-201ENST00000519999 223 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AL391646.1-201ENST00000603860 190 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNVU1-4-201ENST00000612985 164 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 MIR4317-201ENST00000637586 65 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-1047P-201ENST00000364418 107 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-282P-201ENST00000365357 103 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 SNORA18.3-201ENST00000384122 132 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 HSPE1P8-201ENST00000406997 288 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-1304P-201ENST00000411374 106 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Z99755.1-201ENST00000414048 380 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPS7P9-201ENST00000414704 586 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC005005.2-201ENST00000420779 380 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC104687.1-201ENST00000485829 412 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 SNORA70.18-201ENST00000516696 98 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-1092P-201ENST00000516955 87 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC141557.1-201ENST00000540982 400 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC126177.3-201ENST00000551839 688 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AL513043.2-201ENST00000573941 143 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL30P11-203ENST00000598995 310 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-288P-201ENST00000363690 104 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-501P-201ENST00000364072 100 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.485-201ENST00000384395 102 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.578-201ENST00000390903 88 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RN7SKP223-201ENST00000410582 62 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 MRPS18CP6-201ENST00000423587 223 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL23AP14-201ENST00000468281 468 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPL39P34-201ENST00000477141 156 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RPS29P25-201ENST00000481709 171 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC109458.1-201ENST00000508858 316 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 RNU6-635P-201ENST00000516651 102 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC090151.1-201ENST00000520784 730 ntBASIC1.09□□□□□ -2.23
HMCN1Q96RW7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC1.09□□□□□ -2.23
HMCN1Q96RW7 AC023824.2-201ENST00000566185 400 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms