Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 AC103810.1-201ENST00000579873 453 ntBASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
MS4A3Q96HJ5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 RN7SKP111-201ENST00000410349 271 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 Z98742.2-201ENST00000431564 187 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC087499.7-201ENST00000441958 109 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 RNU7-34P-201ENST00000459394 64 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 RNU7-94P-201ENST00000459576 63 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 SCARNA20.4-201ENST00000516969 131 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 HMGB1P40-201ENST00000525121 540 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC126177.5-201ENST00000549599 178 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC007225.2-201ENST00000562529 256 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AC109583.2-201ENST00000617367 129 ntBASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.69□□□□□ -1.66
MS4A3Q96HJ5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 AL450345.1-202ENST00000605741 3881 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP388-201ENST00000362584 119 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 SNORA63.2-201ENST00000362603 126 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP339-201ENST00000390987 122 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 RN7SL346P-201ENST00000491561 294 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 RPL10P14-201ENST00000565265 298 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 MIR3176-201ENST00000582210 90 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 MIR6826-201ENST00000617808 98 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 AC096644.4-201ENST00000563417 2912 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 AL138820.1-201ENST00000617901 5305 ntBASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.68□□□□□ -1.66
MS4A3Q96HJ5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 ICE2P2-201ENST00000483823 2787 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 Y_RNA.173-201ENST00000363776 113 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RNU6-480P-201ENST00000384332 107 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 MIR206-201ENST00000384872 86 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP467-201ENST00000391274 118 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 AC093423.1-201ENST00000440817 142 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PHBP16-201ENST00000446318 950 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP103-201ENST00000459503 118 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RN7SL447P-201ENST00000494711 245 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 AL671862.1-201ENST00000515851 349 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RNU6-807P-201ENST00000516805 107 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 IMMP1LP3-201ENST00000604197 224 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 AC103810.6-201ENST00000606708 136 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 SDAD1P1-202ENST00000524156 2051 ntBASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A3Q96HJ5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 Y_RNA.494-201ENST00000384432 111 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 MIR181B2-201ENST00000385004 89 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 RNA5SP261-201ENST00000410536 106 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 RNU1-142P-201ENST00000516682 145 ntBASIC4.66□□□□□ -1.66
MS4A3Q96HJ5 AC007536.1-201ENST00000533382 349 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms