Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNA5SP513-201ENST00000364648 118 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SNORA71.2-201ENST00000364941 134 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC068538.1-201ENST00000376856 336 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6-484P-201ENST00000384016 107 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6-768P-201ENST00000384683 107 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 MT-TT-201ENST00000387460 66 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SNORD37.2-201ENST00000391075 66 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SNORA26-201ENST00000391286 122 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SDHCP2-201ENST00000398565 501 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RN7SKP202-201ENST00000410439 330 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SNORA74C-2-201ENST00000411179 201 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNA5SP39-201ENST00000411245 120 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RPL30P4-201ENST00000429309 333 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 Z98742.2-201ENST00000431564 187 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL772161.1-201ENST00000439130 476 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RPL39P40-201ENST00000445481 146 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 ABCF2P2-201ENST00000450549 296 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL031183.1-201ENST00000457667 207 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC117454.1-201ENST00000491120 168 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RN7SL466P-201ENST00000497546 295 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RN7SL612P-201ENST00000497704 295 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 ATP5EP1-201ENST00000510257 156 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 BX510359.5-201ENST00000515651 304 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU4-57P-201ENST00000515980 135 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6-856P-201ENST00000516959 98 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SNORA48.11-201ENST00000517015 89 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SCARNA3-201ENST00000517097 143 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RNU6-711P-201ENST00000517255 106 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 CYCSP26-201ENST00000534107 320 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AP006289.1-201ENST00000538089 277 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 MIR378D2-201ENST00000580636 98 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC105245.1-201ENST00000581934 244 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC011447.4-201ENST00000587562 111 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC011487.3-201ENST00000593607 453 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC020914.4-201ENST00000597690 277 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL359881.1-201ENST00000602916 267 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AL356280.1-201ENST00000603614 379 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC107294.3-201ENST00000609211 526 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 FAM27B-201ENST00000610601 213 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC110079.1-202ENST00000635213 138 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC080128.1-201ENST00000474389 1917 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 AC091152.2-201ENST00000591628 2569 ntBASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LCE3DQ9BYE3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 SNURFL-201ENST00000309296 343 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNU1-22P-201ENST00000363334 158 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNU6-944P-201ENST00000364023 107 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 SNORA74A-201ENST00000364089 198 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 SNORA68.1-201ENST00000364537 132 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNA5SP510-201ENST00000364697 99 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNA5SP284-201ENST00000384547 118 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 OR3A2-201ENST00000408891 1076 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 MIR1911-201ENST00000410783 80 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RN7SKP167-201ENST00000411047 285 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNA5SP306-201ENST00000411087 107 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RNU6-57P-201ENST00000411348 103 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 AL035461.1-201ENST00000421490 332 ntBASIC1.17□□□□□ -2.22
LCE3DQ9BYE3 RPS12P10-201ENST00000427031 377 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms