Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR568-201ENST00000385036 95 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RNU2-63P-201ENST00000410792 194 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC004386.2-201ENST00000441858 148 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC093852.1-201ENST00000503587 266 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC131281.1-201ENST00000522984 164 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AP002770.2-201ENST00000543613 532 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC008269.2-201ENST00000561915 1105 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC125232.2-201ENST00000592457 143 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AL356280.1-201ENST00000603614 379 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 AC010999.1-201ENST00000611856 324 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 BX322639.1-202ENST00000423987 2213 ntBASIC3.31□□□□□ -1.88
SYNPOQ8N3V7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU6-238P-201ENST00000363313 106 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.179-201ENST00000363844 90 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU6-944P-201ENST00000364023 107 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU6-281P-201ENST00000384212 103 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU6-220P-201ENST00000390919 107 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 SNORD78.2-201ENST00000391076 69 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AL033519.2-201ENST00000403958 392 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 MIR1294-201ENST00000408503 142 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 SNORD12B-201ENST00000410433 91 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AC007215.1-201ENST00000464893 276 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AC010469.2-201ENST00000496412 480 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RNU2-44P-201ENST00000516795 194 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AC090616.3-201ENST00000582184 217 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 AL355297.2-201ENST00000604792 129 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 U6.92-201ENST00000636464 89 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SYNPOQ8N3V7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.380-201ENST00000365663 111 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 RNU6-196P-201ENST00000384315 107 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 RNY3P4-201ENST00000384428 101 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 MIR1252-201ENST00000408861 65 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 AL161788.1-201ENST00000441805 169 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 U8.20-201ENST00000459445 131 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 AC080013.2-201ENST00000460866 323 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 MRPS35P2-201ENST00000508242 191 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 RNU6-635P-201ENST00000516651 102 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 RNU1-117P-201ENST00000517041 158 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 AC026470.2-201ENST00000561492 181 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 MIR4503-201ENST00000582187 83 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
SYNPOQ8N3V7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.153-201ENST00000363615 91 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 RNU6-318P-201ENST00000384283 103 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 MTCYBP9-201ENST00000431021 303 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AL445687.1-201ENST00000439946 251 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AC091179.1-201ENST00000461606 579 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AC083906.5-201ENST00000503722 328 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 SNORA40.15-201ENST00000516884 107 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 MIR4659A-201ENST00000580269 81 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AL356575.1-201ENST00000603008 283 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 uc_338.1-201ENST00000612113 180 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AL513302.2-201ENST00000562313 1842 ntBASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNPOQ8N3V7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 AL365361.1-201ENST00000566942 3481 ntBASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNPOQ8N3V7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms