Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 HMGB1P29-201ENST00000505659 499 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 FAM206BP-201ENST00000510179 541 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 AC025465.3-201ENST00000510570 311 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 SNORD60.2-201ENST00000516883 86 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.59□□□□□ -2.15
USH1GQ495M9 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 AC008536.2-201ENST00000607284 349 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 AL158063.1-201ENST00000615349 536 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.59□□□□□ -2.15
USH1GQ495M9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
USH1GQ495M9 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 RNU6-296P-201ENST00000384608 107 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 RNU2-41P-201ENST00000410991 178 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1GQ495M9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1GQ495M9 MTCO2P19-201ENST00000427513 598 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 TOMM22P6-201ENST00000465035 409 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AL163973.1-201ENST00000484753 577 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AC091874.1-201ENST00000511402 339 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AC010493.1-201ENST00000513479 292 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1GQ495M9 AC087683.1-201ENST00000591187 441 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 AL391646.1-201ENST00000603860 190 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH1GQ495M9 uc_338.34-201ENST00000617467 174 ntBASIC1.58□□□□□ -2.16
USH1GQ495M9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1GQ495M9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1GQ495M9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.58□□□□□ -2.16
USH1GQ495M9 RNU6-82P-201ENST00000363970 107 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 RNU6-378P-201ENST00000384324 107 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 MIR518E-201ENST00000385252 88 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USH1GQ495M9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1GQ495M9 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 AC073464.1-201ENST00000429823 534 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 C8orf59P1-201ENST00000429930 303 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 AL121601.2-201ENST00000438019 707 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1GQ495M9 AC007395.1-201ENST00000451333 677 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 MTCO3P38-201ENST00000468910 766 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.57□□□□□ -2.16
USH1GQ495M9 Y_RNA.695-201ENST00000516715 107 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 MTND4P7-201ENST00000523876 130 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.57□□□□□ -2.16
USH1GQ495M9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1GQ495M9 MIR5583-1-201ENST00000580941 59 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 AC073114.1-201ENST00000612027 490 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 HULC.1-201ENST00000612720 240 ntBASIC1.57□□□□□ -2.16
USH1GQ495M9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USH1GQ495M9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 RNU6-438P-201ENST00000365561 103 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 SNORD116-8-201ENST00000384365 95 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
USH1GQ495M9 RNU6-1106P-201ENST00000390845 107 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.56□□□□□ -2.16
USH1GQ495M9 MTCYBP8-201ENST00000422855 651 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.56□□□□□ -2.16
USH1GQ495M9 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 CCDC34P1-201ENST00000507441 517 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 SNORA14.1-201ENST00000516113 141 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 RNU6-1098P-201ENST00000516772 96 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
USH1GQ495M9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.56□□□□□ -2.16
USH1GQ495M9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.56□□□□□ -2.16
USH1GQ495M9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH1GQ495M9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH1GQ495M9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 Y_RNA.504-201ENST00000384481 104 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 RNU6-1158P-201ENST00000391167 107 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC139712.2-201ENST00000424302 339 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1GQ495M9 SNRPEP8-201ENST00000442866 260 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1GQ495M9 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 MTCYBP18-201ENST00000501056 747 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC114801.2-201ENST00000503825 781 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC097473.1-201ENST00000508142 408 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC091133.4-201ENST00000511142 308 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AP003033.1-201ENST00000527244 415 ntBASIC1.55□□□□□ -2.16
USH1GQ495M9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.55□□□□□ -2.16
USH1GQ495M9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.55□□□□□ -2.16
USH1GQ495M9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.55□□□□□ -2.16
USH1GQ495M9 AC008088.1-201ENST00000580993 280 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms