Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RPS29P22-201ENST00000472363 168 ntBASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 RN7SL176P-201ENST00000580352 264 ntBASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SPDYE4A6NLX3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 MIR1255A-201ENST00000408338 113 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 AC092017.2-201ENST00000427600 362 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 AC025750.2-201ENST00000442609 450 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 BX284632.1-201ENST00000478218 541 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 RNA5SP395-201ENST00000516567 118 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 MIR4330-201ENST00000579077 105 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 AC011447.4-201ENST00000587562 111 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 IGLL4P-201ENST00000614590 133 ntBASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.61□□□□□ -1.51
SPDYE4A6NLX3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RNY1P1-201ENST00000364372 112 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RNY1P6-201ENST00000384193 109 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RNA5SP104-201ENST00000410989 118 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RPL35AP21-201ENST00000437667 333 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 HMGN2P18-201ENST00000450680 270 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RN7SL738P-201ENST00000470264 297 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 AC022137.1-201ENST00000483735 151 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 SCGB1D5P-201ENST00000515134 247 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 RN7SKP21-201ENST00000516503 220 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 AC134698.5-201ENST00000519444 336 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 AL359075.3-201ENST00000613288 217 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 uc_338.18-201ENST00000615451 175 ntBASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SPDYE4A6NLX3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 ZNF271P-202ENST00000465539 1970 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU1-94P-201ENST00000362627 173 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU1-32P-201ENST00000363937 159 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU6-816P-201ENST00000390914 107 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU6-1268P-201ENST00000391214 107 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU6-1239P-201ENST00000391310 107 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNA5SP38-201ENST00000410750 119 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RPS15AP28-201ENST00000435088 386 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 PPIAP15-201ENST00000479662 484 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 SNORA4.4-201ENST00000515921 135 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNA5SP360-201ENST00000516555 118 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 RNU6-586P-201ENST00000517265 104 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 AC244107.2-201ENST00000611773 76 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SPDYE4A6NLX3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SPDYE4A6NLX3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SPDYE4A6NLX3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SPDYE4A6NLX3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 MIR802-201ENST00000390235 94 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 COX6B1P1-201ENST00000415962 213 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 AL500522.2-201ENST00000448562 343 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 RPL39P39-201ENST00000455840 151 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 RPL23AP67-201ENST00000465341 474 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.58□□□□□ -1.52
SPDYE4A6NLX3 AC002546.1-201ENST00000588041 2504 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 RNU1-96P-201ENST00000364163 162 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 RNU6-1104P-201ENST00000384723 104 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 HSPE1P26-201ENST00000405341 275 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 U3.32-201ENST00000408116 212 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 RNA5SP113-201ENST00000410486 84 ntBASIC5.57□□□□□ -1.52
SPDYE4A6NLX3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms